Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00204 ATGGGTCTTTGCTTGGGTTCTCCCAGAAACCACGGACCTGAAACCAGCGTCACAAGGCCTTCTAGTTTTGACAGCAAGCACTTACAGTCCTCTGCAACGGGAAGCAGTGCAGGGAGGAGCCAATTCTCTGAATTAGCAAGTGGGAGCATTGACGAGCCTTACTGGTATCCCAATGGGCAAATCTTGGATCGTCCTAACTTAAAGGAGTTTACTTTTAATGATATGAAGGCTGCTTCCAGGAATTTCAGATCAGATTCATTAATTGGAGAAGGGGGGTTTGGGAAGGTTTACAAGGGTTGGATGGATGCGAAGACACTCTTGCCAACTAAGTTTGGCACTGGAATGGTAGTAGCTATTAAGAAACTAAGCCCAGAAAGTATGCAAGGCATTCTGGAGTGGCAGTCTGAAGTTAACTTCCTGGGAAGGCTTTCCCACCCCAACCTGGTCAGACTATTGGGTTTTTGTGGAGAGGATAAGGAACTGCTCCTTGTGTATGAGTTCATGCCGAGGGGAAGCTTGGAAAATCACCTCTTTAGAAGAAATCCTAATATTGAGCCTCTTTCCTGGAAAATGCGACTCCAAATAGCTATTGGAGCAGCTCGGGGCCTGGCTTTTCTACACACTTCAGATAAAAAAGTCATTTATAGAGACTTCAAGGCATCCAACATACTGCTTGATGGGAACTACAATGCCAAAATTTCTGACTTTGGCTTGGCTAAGTTCGGGCCGTCCGCCGGAGAGTCACATGTGACGACCAGGGTCATTGGCACCCATGGTTATGCTGCTCCAGAATACGTTGCAACAGGTCATTTGTACGTTAAGAGTGATGTGTACGGCTTTGGTGTTGTGTTGCTTGAAATGATGACTGGCCTACGAGCACTTGATACAAAGCGACCCAGTGGGCAGCAAAATCTGGTTGATTGGGTGAAGCCGTTGCTTTCTAACAAAAGGAAGTTGAAATCAATCATGGATGCAAGAATGGAGGGTCAGTACTCTTCCAAGGCATCTTTTCATGCGGGACAACTTGCCTTAAAATGCTTAGAAGCTGATCCTAGGAATCGTCCTTCCATGAAAGAAGTGCTGGATGCATTAGAAAAAATTGAAGCAATGAATGAGAAACCAAATCCAAAGGAACAAAAACCAAGCAATTCTAAAAAATCTCCAGATCCTCGCCGCCGCATCGGCAGGTAG 1191 0.4568 MGLCLGSPRNHGPETSVTRPSSFDSKHLQSSATGSSAGRSQFSELASGSIDEPYWYPNGQILDRPNLKEFTFNDMKAASRNFRSDSLIGEGGFGKVYKGWMDAKTLLPTKFGTGMVVAIKKLSPESMQGILEWQSEVNFLGRLSHPNLVRLLGFCGEDKELLLVYEFMPRGSLENHLFRRNPNIEPLSWKMRLQIAIGAARGLAFLHTSDKKVIYRDFKASNILLDGNYNAKISDFGLAKFGPSAGESHVTTRVIGTHGYAAPEYVATGHLYVKSDVYGFGVVLLEMMTGLRALDTKRPSGQQNLVDWVKPLLSNKRKLKSIMDARMEGQYSSKASFHAGQLALKCLEADPRNRPSMKEVLDALEKIEAMNEKPNPKEQKPSNSKKSPDPRRRIGR* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00204 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Pte11g00204 396 Pfam Protein kinase domain 83 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00204 396 MobiDBLite consensus disorder prediction 11 40 - -
Pte11g00204 396 CDD STKc_IRAK 88 367 - -
Pte11g00204 396 MobiDBLite consensus disorder prediction 366 396 - -
Pte11g00204 396 ProSitePatterns Protein kinases ATP-binding region signature. 88 121 IPR017441 GO:0005524
Pte11g00204 396 Gene3D Transferase(Phosphotransferase) domain 1 168 389 - -
Pte11g00204 396 ProSiteProfiles Protein kinase domain profile. 82 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00204 396 PANTHER OS01G0588500 PROTEIN-RELATED 33 368 - -
Pte11g00204 396 FunFam Serine/threonine-protein kinase PBS1 168 383 - -
Pte11g00204 396 SUPERFAMILY Protein kinase-like (PK-like) 63 366 IPR011009 -
Pte11g00204 396 Gene3D Phosphorylase Kinase; domain 1 58 167 - -
Pte11g00204 396 FunFam Serine/threonine-protein kinase BIK1 53 167 - -
Pte11g00204 396 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00204 Pte-Chr11 2360192 2363570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00204 68 364 Glycoside Hydrolase AT3G07070 48.658 2.19e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte11g00204 Pkinase 7.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00204 - - qsa:O6P43_024954 583.563