Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00202 ATGTCTGGGAAAATCATGACCGATGAGCAATTTGAAGCTCTCAGGAAGCAAGTAGCCGTTTATGGCGTCATTTGTGAGCAGTTGGAGCAGAAAGCCATGAAACTTGCACCACAAGATCTCCAAGTGTTCAGGATGGGGCAGCTATATGGTCAATCCTTCATGTCATCCACTGCGCCAAGAATGATCTCCAGACAACGGTGGCAGCCGACTGCTGAGCAGATTCAGATTCTTGAGAACATATTCAATCAAGGAACTGCTACTCCAACCAGGGAAAATGTCAAAGAAGTCACTGCTGAACTGAAATTGTATGGAGACGTGAAGGAAACAAATGTGTATAATTGGTTTCAGAACAGGCGTGCAAGGAAAAGAAAACGAAAATTCCAACCAAACAACAAAAACGCTGTGCAGCCTCAAGTGGACATTGAAAATAAGTCAACAAAGCTCAACAACAGTACTCTTCAGTCTCAGCCTTATGGTGAATCCGCTGGCAGGTATAACGAACGCTGCTTCCTGTATCCCAATGGATCTTCTGATATGCATTTTCTAGGTCCTCATACAAACGAGGAAGATCCTATTGCCATGCTTGTATCAGACGGCAGTCTAAATCCAACACTGAATTACACTCCATTGGCAGTTTGGGAAGAGCTGCTCTGCCGTTCAAACTATGGAATTGAAGAAAGCGATCATCGTCGTAACGCCAAGACGGACCCTCCTGTACATAATACGTACCGGCAACAAGGAGACTGCGACGTGAAAAATCGAGGATTCGTTTTGGCACAAGACTTCAAAGCGAAGACTAGCTCATGA 807 0.4486 MSGKIMTDEQFEALRKQVAVYGVICEQLEQKAMKLAPQDLQVFRMGQLYGQSFMSSTAPRMISRQRWQPTAEQIQILENIFNQGTATPTRENVKEVTAELKLYGDVKETNVYNWFQNRRARKRKRKFQPNNKNAVQPQVDIENKSTKLNNSTLQSQPYGESAGRYNERCFLYPNGSSDMHFLGPHTNEEDPIAMLVSDGSLNPTLNYTPLAVWEELLCRSNYGIEESDHRRNAKTDPPVHNTYRQQGDCDVKNRGFVLAQDFKAKTSS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00202 268 SUPERFAMILY Homeodomain-like 58 125 IPR009057 -
Pte11g00202 268 SMART HOX_1 62 129 IPR001356 GO:0003677
Pte11g00202 268 CDD homeodomain 64 117 IPR001356 GO:0003677
Pte11g00202 268 ProSiteProfiles 'Homeobox' domain profile. 60 125 IPR001356 GO:0003677
Pte11g00202 268 PANTHER WUSCHEL-RELATED HOMEOBOX 13 3 202 IPR044559 GO:0003700
Pte11g00202 268 Gene3D - 63 128 - -
Pte11g00202 268 MobiDBLite consensus disorder prediction 227 246 - -
Pte11g00202 268 Pfam Homeodomain 64 124 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00202 Pte-Chr11 2339827 2341544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00202 1 190 Wox Gene Family AT4G35550 41.905 1.81e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pte11g00202 Homeodomain 1.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00202 - - gmx:100817342 186.808