Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00187 ATGAAACCACGAGATGTTGATCGAAGGACTGGAGGTACACAGATGGCATGGAGTCAATATAATGAAATCCTCGGAAAAGGGGCTTCAAAAACAGTCTATAGAGCCTTTGATGAATACGAAGGAATTGAAGTGGCCTGGAATCAGGTGAAGCTTTATGACTTTCTGCAGAGCCCTGAAGATCTTGAGAGGCTTTATTGTGAAATTCATCTCCTTAAAACCTTGAAACATGAGAACATCATGAAGTTCTACACTTCCTGGGTTGATACAACCAATAGGAACATTAACTTTGTCACTGAAATGTTTACTTCTGGAACTCTCAGGCAGTACAGGCTGAAACATAGAAATGTTAACGTCAGAGCTGTAAAGCATTGGTGTAGGCAAATTTTGAAAGGCCTGCTTTATCTCCACAGTCATGACCCGCCTGTAATCCACAGAGATCTTAAGTGTGATAATATTTTCATTAACGGCAACCAGGGGACACCGGAGTTCATGGCTCCTGAAGATATTGGAATGGCAGGAGTCTGGCGGCAAGGAACTGGGGCACAACCTGGTGGGATGGGACACGGGCATTGA 573 0.438 MKPRDVDRRTGGTQMAWSQYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHENIMKFYTSWVDTTNRNINFVTEMFTSGTLRQYRLKHRNVNVRAVKHWCRQILKGLLYLHSHDPPVIHRDLKCDNIFINGNQGTPEFMAPEDIGMAGVWRQGTGAQPGGMGHGH* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00187 190 Gene3D Phosphorylase Kinase; domain 1 10 99 - -
Pte11g00187 190 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Pte11g00187 190 SMART serkin_6 18 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00187 190 Gene3D Transferase(Phosphotransferase) domain 1 101 172 - -
Pte11g00187 190 SUPERFAMILY Protein kinase-like (PK-like) 17 169 IPR011009 -
Pte11g00187 190 FunFam Probable serine/threonine-protein kinase WNK1 6 99 - -
Pte11g00187 190 Pfam Protein kinase domain 21 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00187 190 ProSiteProfiles Protein kinase domain profile. 18 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00187 190 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 17 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00187 Pte-Chr11 2248128 2249596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00187 17 185 MAP Kinase Kinase Kinase AT3G22420 71.006 9.84e-84 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pte11g00187 Pkinase 2.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00187 K08867 - cave:132170378 294.664