Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00182 ATGCCAGTTGACAGTATCCCACCAAAACCAGAAAACTCCAGTAGCAGCACTAAACCAGATCATGACGGACTGCTCCAGATGACTGATGAGTCAGCAAGACATAGTTCAGCTGTGCTTGCTTACCCCTTACAGATCAATCAACAGCCCTTTCTACAACTCGCTTTGTTTCCTATAACTTTGAAGTTTGAGGAATTGGTTTACAAAGTTAAACTCGAACAAATAGGAGTATGTTGCTGCAGCACATGGGAGACAAAAGAAAAGAACATATTGAATGGTATAACAGGCATGGTTTGTCCAGGAGAGATTCTGGGTATGTTAGGCCCATCTGGCAGTGGAAAGACAACTCTTCTTACAGCTCTAGGAGGCCGACTCAGCGGCAAATTATGGGGAAAGATCACATACAATGGTCAACCATTTTCAGGTTCCATAAAAAGAAGAACAGGCTTTGTTGCTCAGGATGATGTCTTGTATCCCCACCTGACTGTCACTGAAACTTTGGTATTCACAGCACTTCTAAGGCTGCCTAATAGTTTGACCAAAGATGAGAAGGTTCAGCATGTGGATAGAGTCATCACTGAGCTTGGATTATCAAGATGCAGAAGCAGCATGATAGGGGGACCCCTCTTTAGAGGAATATCAGGTGGGGAGAAGAAGAGAGTGAGCATAGGGCAGGAAATGCTAATCAATCCAAGCTTACTGTTACTTGATGAGCCTACCTCAGGTTTGGACTCAACAACAGCTCAAAAGATCATGAGCACAATCAAACAGCTTGCTAATGGAGGAAGAACTGTCGTCACCACCATCCATCAACCATCTAGTCGTCTTTACCATATGTTTGATAAGGTGGTCTTGCTTTCCGATGGGTGGCCAATCTATTATGGTGCTGCGTCAATAGCACTGAATTATTTTTCATCAATTGGCTTTTCCACATCCTTGACTGTCAATCCTGCTGATCTTTTACTTGATCTTGCCAATGGGATTTCCCCGGACTCTGGGGAATCTACTGAGCAAAGTGAGAACATGGAGCAAGAAAGGAAGCTGGTCAGAGAAGCTCTTATTTCTGCTTATGACAAGAATATTGCAACAAGGTTGAAAGCTGAACTTTGCAGCTTGGAGGTGAACAGCTACATCAACTGCAACAGCAAAGATGACTCAGCAAAACAATGGTGCACTACCTGGTGGTACCAATTCAAGGTGCTGTTACAGAGGGGAGTAAGAGAACGAAGATATGAAGCCTTCAACAAGCTGAGAATATTCCAAGTTATCAGCGTTGCATTTCTTGGTGGACTTCTGTGGTGGCATACTCCAGAATCCCACATCGAAGATAGGATAGGTTTGCTGTTCTTCTTCTCTGTCTTCTGGGGTTTCTATCCACTCTACAATGCAGTTTTCACATTTCCCCAGGAAAGAACCATGCTGATCAAGGAAACCTCATCTGGGATGTACCGCCTATCTTCCTACTTTCTCGCAAGAACTGTAGGAGACTTGCCACTGGAACTTGCTCTACCAACTGCATTTGTTTTCATTATTTATTGGATGGGAGGGCTAAAACCAGATCCCTTCACATTCATTCTCTCTATTCTTGTGGTTCTTTACAGTGTCCTTGTGTCTCAGAGTCTTGGCTTAGCCTTTGGTGCTATTCTGATGGACATTAAGCAAGCTACTACTCTGGCTTCTGTTACAACCCTTGTGTTCCTTATTGCTGGAGGGTATTACATACAGGAGATCCCACCTTTCATAGTCTGGTTCAAGTATTTCAGTTACAGTTACTACTGCTACAAACTTCTTCTTGGAGTTCACTACGAAGAAGATGATCTTTATGAGTGTTCCAAAGGTGTCTGGTGCAGGGTTGGGGATTTTCCAGCTATTAGATCAATGGGGCTAAATCATTTGTGGGTGGATGTTTCCATCATGGCACTAATGTTGGTGGGTTATCGTCTCATTGCTTTCTTAGCTTTGCGAAGAGTCAGGATGAGGTAA 1980 0.4354 MPVDSIPPKPENSSSSTKPDHDGLLQMTDESARHSSAVLAYPLQINQQPFLQLALFPITLKFEELVYKVKLEQIGVCCCSTWETKEKNILNGITGMVCPGEILGMLGPSGSGKTTLLTALGGRLSGKLWGKITYNGQPFSGSIKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPNSLTKDEKVQHVDRVITELGLSRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQKIMSTIKQLANGGRTVVTTIHQPSSRLYHMFDKVVLLSDGWPIYYGAASIALNYFSSIGFSTSLTVNPADLLLDLANGISPDSGESTEQSENMEQERKLVREALISAYDKNIATRLKAELCSLEVNSYINCNSKDDSAKQWCTTWWYQFKVLLQRGVRERRYEAFNKLRIFQVISVAFLGGLLWWHTPESHIEDRIGLLFFFSVFWGFYPLYNAVFTFPQERTMLIKETSSGMYRLSSYFLARTVGDLPLELALPTAFVFIIYWMGGLKPDPFTFILSILVVLYSVLVSQSLGLAFGAILMDIKQATTLASVTTLVFLIAGGYYIQEIPPFIVWFKYFSYSYYCYKLLLGVHYEEDDLYECSKGVWCRVGDFPAIRSMGLNHLWVDVSIMALMLVGYRLIAFLALRRVRMR* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00182 659 Gene3D - 78 305 IPR027417 -
Pte11g00182 659 FunFam ABC transporter G family member 22 77 306 - -
Pte11g00182 659 CDD ABCG_EPDR 57 294 - -
Pte11g00182 659 SMART AAA_5 99 289 IPR003593 GO:0016887
Pte11g00182 659 MobiDBLite consensus disorder prediction 1 24 - -
Pte11g00182 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 304 IPR027417 -
Pte11g00182 659 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 60 312 IPR003439 GO:0005524
Pte11g00182 659 Pfam ABC-2 type transporter 395 598 IPR013525 GO:0016020|GO:0140359
Pte11g00182 659 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 28 648 - -
Pte11g00182 659 Pfam ABC-2 type transporter 269 338 IPR043926 GO:0140359
Pte11g00182 659 MobiDBLite consensus disorder prediction 8 22 - -
Pte11g00182 659 ProSitePatterns ABC transporters family signature. 212 226 IPR017871 GO:0005524|GO:0016887
Pte11g00182 659 Pfam ABC transporter 90 240 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00182 Pte-Chr11 2212840 2215815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00182 100 297 Calmodulin-binding Proteins AT2G36910 24.390 2.01e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00182 K05681 - qsa:O6P43_025010 1066.99