Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00177 ATGAACCTATCTAGAAACGGCAAGGCCACAACCCAGGCTTGTGCTTCTTGTAAGTACCAACGTAAAAAGTGCGTCCCTGACTGCATTCTCGCCCCTTATTTTCCTCATGATCGCCAAAGACAATTCCTCTATGCCCATAAATTATTTGGTGTCAGCAACATAACAAGAATGATCAAACACCTTGACCCTCTTGAGAAAGACGAGGCCATGCGTTCCATCATTTTCCAATCTGATGTTCGTGCCACCGACCCTGTTGGCGGTTGTTACAGAATCATATGTGACCTGCAAACTCAGATCGAATACTGCAGGGCCGAACTTGATCTTGTTCTTCAACAGCTAGCCATATTTCGAGCTCAACCTCACAAACTGAATCAACAACCCCATCGTCCTCGACAAATGTATAACGACAGTGGTGCAGTGGTGAACGGTGGTGATCATCACGATCACATTATCAATAATGCTGATCATTCGAGCTTGTATAATCCAGCTGCTACGTTTTATCATTATGTTCCGCAGCCACAGCAAGATCAATACGGCTCGGTTCAGCATAGTAACAGTAATAGCAACGATAATTCACTATCACGAGTGGAAGATCCAAACTCGCGGGCTGTGCAGAATACAATGTCGCTTCAGGGCAACAGCGCAGTTGGCGACCCATACGAAAACAGAGCAGTCTTAAGTATACCTTCATCAAAGACAGAATATCCCAGATTTGATATTACAGAAGATTTTGAAATGTGGAGCGATGAAGAGGTTTTATTTAAACTGGTAGACGGAGTATTAATAAAAGCAGGGGATGATCCTTCCCATCAAGCTCAAGATCACGATCTTCAAGTGAGGAAAAGCAGCCCTGGTGTACTCCTAAGCAGCAGAGTCATTGTTGGCAAAGTTGGTCACACGTCTACACTCTGTGACATGAATGAGCTTTTCCTATGGTTGTACTTCAAATTTAACTCTCAACCCCAGTCGTTACTTTGA 978 0.4397 MNLSRNGKATTQACASCKYQRKKCVPDCILAPYFPHDRQRQFLYAHKLFGVSNITRMIKHLDPLEKDEAMRSIIFQSDVRATDPVGGCYRIICDLQTQIEYCRAELDLVLQQLAIFRAQPHKLNQQPHRPRQMYNDSGAVVNGGDHHDHIINNADHSSLYNPAATFYHYVPQPQQDQYGSVQHSNSNSNDNSLSRVEDPNSRAVQNTMSLQGNSAVGDPYENRAVLSIPSSKTEYPRFDITEDFEMWSDEEVLFKLVDGVLIKAGDDPSHQAQDHDLQVRKSSPGVLLSSRVIVGKVGHTSTLCDMNELFLWLYFKFNSQPQSLL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00177 325 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Pte11g00177 325 Pfam Lateral organ boundaries (LOB) domain 13 108 IPR004883 -
Pte11g00177 325 MobiDBLite consensus disorder prediction 176 200 - -
Pte11g00177 325 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00177 Pte-Chr11 2191001 2192303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00177 12 180 AS2 family AT3G13850 56.471 1.18e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte11g00177 LOB 1.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00177 - - vum:124830493 265.003