Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00175 ATGGATCCAAGCTACGAATCGGACGATGAAGATGATTCTGATGCTGGAGTGCAAGAGGAGAAGAAAGACGACAATTGGAGATCAAAAGGTTATGCCTTTAATAGGATAGCGACTGGACCTATCTCTCCAAGAAGTAGGAATTATGTCTTGAATGATGCCAGGAGCAGGGTAAACAACACATTAGCTACCAATTGCAATCAACTTGGTGGAAAATATATTGTTGAAAATGTGGTCAATCCTACTGCTCAAGGAAATGGGGATTCTAATGATGCAATGGTGATGGTATCGAAGTTGTCGTCTCTTCTTGCCTCTGATATTCTACCTTCGCCAAACTTGAAACGAACAGAGCTTTCAGTAGATGATTTTGAGTCTTATAATATATGGCACTATGAGGATCCGTCCGGAAAAACTCAAGGGCCGTTTTCCTTGTTCCAACTGCGAAAATGGTTTGCAGCTGGACATTTCCCTGCAGATCTGAGAGTATGGAGGACTAATGAGAAGAAAAATGATTCAATATTGTTAACGGATGCGCTAAATGGTAAATGTCATGAAAATGTGTCACCTGGGCAATTTATATCGTTGGGTGTCACACTTCCTTCAGATGAAAGTGATCGTTGTAAGAGTCAGGGAATAAACAATATAGACAACAGCATTGACCAAAAGCTGAAGAAGTGTAGCCCCCAGCATAATGGCAGTGATGAATCAGTCAAGAGCAATGAATGGAACTGTCATTTGTCTGGTCATAGTAAACATGCAGATTTTGTGAGGGCAAAAGAGGAGCAGAGTGAAGGCACCCAAACGAGTTTGGATTTGGCAAAATGGAATGTCCTTAGTCATGGTAAGACTGAGGCCAGCCAGCCATTACCCTCGACTGCATTTACTACGATGTTGCGTGAGATTACTTCTGAGTGTAAAAGAGATGGTTATAGGATTGACATAAATTCTGATGCGAATGATGGCAACCAGAATTTGCTCAAGGCTTCTATCTCTCAAAGTGATCAAGTTCTTCCAAAACATTCAGACAGTGAAGGTCACTCTGGTCAATCTTCAGAGCATAACTGGAGACATCCTCCCCTTAGTGGTTTCTCTAGTTGCTTGGACTCGAATTCTACTTTTGTTTCTACGACTAAAGAAGCAGAGCAGAATCAGTTGACCAGTACCCCAAATATTCCTAGTTCAACTGCTGTAAACAGCACCTCTGATTGTTGGGATTCCAAGTGTACTTTTGCTTCTGTTAATAAAGCATTGCAGCCAAATGAGGAAATTGATTTTTTTGAGTTGCCAAGTCCCACTCCCAAACCAAGTTGTTTGGTGAGGAGTCAGGCAGGTGAGAACAAACAGTCTCCGTCTTCGAGTATTCCAGTTCATGATGCTGGTCACTGCTGGAGCACTGCTTCCAGTTTGGTTTGTGGTCCAGTACCACATCCTGAAGCTGGCGTTGAATGGACAGAGTATTCAGCTGTGCCTCCCAAACCTTCTATTGAGGAATGGGATTCCAGTTTTGTCTCTGCTTCCTCTTCGAGACCAACCAAAATAATGGCTGACCATGCTGCTACTCCATCTTCAATAAATTGTGGACAAACTCATTCTCCACCACACCGACCAGCCTGTACTGAGTCTAATTGGAATGCAATAATTGGTGAGGCCAATGAATTTAACTCATTAGTAGATGAATCAGTTTCTGATCTGTTGGCTGAGGTTGAGGCCATGGAGTCTCTTGGTGGACTGGATTCTCCCACATCCATCATGAAATGTGGCGAGGAGTTAATCGTTGGATCTAAGAATGATTGTCTCAGTTCTGGCGAAGGATTTAGCCCTATGCCTGATCAAGGTAAAAGTGATGCACTTAGCTCCACAACTGATGCGAAATTACCTACTCATTCCACTGTCAGTGAAGCGCCAAATACAGGATATCAAGCGGATATGCTCCACTACCAAAGATTATCCGTTCCACTTCCTACTGCACGTGCTCAATCTGGAGAAGCTACAAAGAAGAGTGATGCTTTAGGTCGTCAATGGGAAGCAGGTACTGGTGTCCCAGTCTCCGTACAACCATCTACTACGACTTGGGAGGTAACAGACACCACCTGGAGATTGGGATCAGATAGTACAAACACCAGTTGGGGGACGTCTCACGTAAGTACAAACATGTGCTGGAGTGCATTAAAGGAGGGAAATACAAATATGAATTGGGGGGTTACTCAAGGCACTGCGCATGGAAATGGAAGCCTCAGTTCTTGCACAACCACAGGTAATCCAGTCGTTTGGGGAACCCAAACAAGATATGTCAATGATAGACTTTCTTCCCCACGAGACGGTGATTTTCATGGAAGAGATTATAATTTTGATAGGGGTAGGACTGTTGGGAACAGGCTACCATTCTTTGGCATGGCTAATGGAGGAGGGAGCCATGGTCACAACCACAGGCATGCTACAAAGGGGCAGCGGGTCTGTAAATATTATGAACGTGGGCATTGCAAGAAGGGAGCATTATGCAGTTATTGGCATCCATGA 2514 0.4387 MDPSYESDDEDDSDAGVQEEKKDDNWRSKGYAFNRIATGPISPRSRNYVLNDARSRVNNTLATNCNQLGGKYIVENVVNPTAQGNGDSNDAMVMVSKLSSLLASDILPSPNLKRTELSVDDFESYNIWHYEDPSGKTQGPFSLFQLRKWFAAGHFPADLRVWRTNEKKNDSILLTDALNGKCHENVSPGQFISLGVTLPSDESDRCKSQGINNIDNSIDQKLKKCSPQHNGSDESVKSNEWNCHLSGHSKHADFVRAKEEQSEGTQTSLDLAKWNVLSHGKTEASQPLPSTAFTTMLREITSECKRDGYRIDINSDANDGNQNLLKASISQSDQVLPKHSDSEGHSGQSSEHNWRHPPLSGFSSCLDSNSTFVSTTKEAEQNQLTSTPNIPSSTAVNSTSDCWDSKCTFASVNKALQPNEEIDFFELPSPTPKPSCLVRSQAGENKQSPSSSIPVHDAGHCWSTASSLVCGPVPHPEAGVEWTEYSAVPPKPSIEEWDSSFVSASSSRPTKIMADHAATPSSINCGQTHSPPHRPACTESNWNAIIGEANEFNSLVDESVSDLLAEVEAMESLGGLDSPTSIMKCGEELIVGSKNDCLSSGEGFSPMPDQGKSDALSSTTDAKLPTHSTVSEAPNTGYQADMLHYQRLSVPLPTARAQSGEATKKSDALGRQWEAGTGVPVSVQPSTTTWEVTDTTWRLGSDSTNTSWGTSHVSTNMCWSALKEGNTNMNWGVTQGTAHGNGSLSSCTTTGNPVVWGTQTRYVNDRLSSPRDGDFHGRDYNFDRGRTVGNRLPFFGMANGGGSHGHNHRHATKGQRVCKYYERGHCKKGALCSYWHP* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00175 837 MobiDBLite consensus disorder prediction 611 634 - -
Pte11g00175 837 MobiDBLite consensus disorder prediction 1 17 - -
Pte11g00175 837 MobiDBLite consensus disorder prediction 435 454 - -
Pte11g00175 837 MobiDBLite consensus disorder prediction 600 634 - -
Pte11g00175 837 Pfam GYF domain 128 168 IPR003169 GO:0005515
Pte11g00175 837 ProSiteProfiles Zinc finger C3H1-type profile. 812 837 IPR000571 GO:0046872
Pte11g00175 837 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 1 837 - -
Pte11g00175 837 SUPERFAMILY CCCH zinc finger 813 836 IPR036855 GO:0046872
Pte11g00175 837 SMART gyf_5 126 181 IPR003169 GO:0005515
Pte11g00175 837 ProSiteProfiles GYF domain profile. 125 179 IPR003169 GO:0005515
Pte11g00175 837 Gene3D - 127 182 IPR035445 -
Pte11g00175 837 CDD GYF 127 180 IPR003169 GO:0005515
Pte11g00175 837 MobiDBLite consensus disorder prediction 435 455 - -
Pte11g00175 837 SUPERFAMILY GYF domain 126 178 IPR035445 -
Pte11g00175 837 MobiDBLite consensus disorder prediction 1 25 - -
Pte11g00175 837 MobiDBLite consensus disorder prediction 331 360 - -
Pte11g00175 837 MobiDBLite consensus disorder prediction 373 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00175 Pte-Chr11 2178432 2181040 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pte11g00175 GYF 5.4e-13 CL0673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00175 - - qsa:O6P43_033643 562.377