Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00166 ATGGCTGGCCTTTTCTCATTAGGCGGAGGAAGCAACAGAGGTAATAACAGCAACCAAGAGCAAGAACCACAACACCGAAGCGATACAGAAATTCCTCATTCAGAGAGTTTAGTTTGGTACAGAAACGAAGATGTTCCGTACAGCAGGGGTTTCGAGTTATGGCAGCAGCAGCAACTCCTTCTTCAACAACAGAGACAATATCTCCACCAACAAGACCTTTACTCGTCAGCTGCTGCCTTAGGCGTGGGACCTAGTGGGAGCTCAATCAACATAGCCATGTCGGATGACCATTCATCATCGAGATCGGCCTTCATGATGATTGGGTCTTCAAGTGCTACCGGAAGAAGTAGTGGTGGTGGAGGAGGAATAAGTTGCCAGGACTGTGGGAATCAAGCCAAGAAGGACTGCATTCACATGCGGTGTAGGACATGCTGTAAGAGCCGAGGCTTGGACTGCCCGACCCATGTTAAAAGCACTTGGGTTCCAATTGCGAAGCGTCGTGAACGGCAACAGCAACTAGCTTCTTTGCAGCAACAACAAGATCAACCCCAACGCCAGCAGCAACTTCAACTTCGTGGAGAGAACTACAAAAGGGAGAGAGCTAGTACTAGCAATGATAACCCAAACACATCTCTTGCCTGCACTCGCCTGCCCAACTTCTCATCAGGGTTAGAGCTTGGGAATTTCCCAGCCCAGGTGAACTCTTCTGCGGTATTCCGATGCGTGCGAGTGACATCAATCGATGACGCTGACGACCAATATGCGTATCAAACGGCTGTGAACATTGGGGGCCATCTTTTCAAGGGAATTCTTTATGATCAAGGCCCCGAGAGTAATTACATGGCTCCAGGTGAGAGCTCTTCCGGTGGTGGGACTATTGGTGGAATTCAACCCTTGAACCTCATACCTAGTGCTGCTGATCCCGCCAGCACTTCTACCATGGGCACTAGTGTAAGTGGTGACGGTGGTGGAGCTGTGGCAGGATCTTCTGCTGGGGTACTTGTTGACCCTTCTCTCTATCCATCTCCTCTCAACTCCTTCATGGCTGGTACGCATTTCTTCCCACATCCAAGATCTTGA 1080 0.4991 MAGLFSLGGGSNRGNNSNQEQEPQHRSDTEIPHSESLVWYRNEDVPYSRGFELWQQQQLLLQQQRQYLHQQDLYSSAAALGVGPSGSSINIAMSDDHSSSRSAFMMIGSSSATGRSSGGGGGISCQDCGNQAKKDCIHMRCRTCCKSRGLDCPTHVKSTWVPIAKRRERQQQLASLQQQQDQPQRQQQLQLRGENYKRERASTSNDNPNTSLACTRLPNFSSGLELGNFPAQVNSSAVFRCVRVTSIDDADDQYAYQTAVNIGGHLFKGILYDQGPESNYMAPGESSSGGGTIGGIQPLNLIPSAADPASTSTMGTSVSGDGGGAVAGSSAGVLVDPSLYPSPLNSFMAGTHFFPHPRS* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00166 359 Pfam Domain of unknown function (DUF702) 122 277 - -
Pte11g00166 359 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 345 IPR007818 GO:0003700|GO:0006355
Pte11g00166 359 NCBIfam putative zinc finger domain, LRP1 type 124 166 IPR006510 -
Pte11g00166 359 NCBIfam LRP1 C-terminal domain 229 276 IPR006511 -
Pte11g00166 359 MobiDBLite consensus disorder prediction 170 191 - -
Pte11g00166 359 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00166 Pte-Chr11 2029221 2031524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00166 1 354 C2H2 Transcription Factor Family AT5G66350 50.535 1.05e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pte11g00166 DUF702 1.7e-67 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00166 - - jre:108992063 366.311