Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte11g00157 | ATGGCATCTAACTCCATGACTTCATCACGTAGTTCCAGCTCTTCTTGGACACCTAAGCAAAACAAAATGTTCGAGAGGGCCCTGGCTAAATATGACAAGGACACACCTGACCGCTGGCAGAACGTTGCTAATGCCGTGGGTGGTAAAACTGCAGATGAGGTTAAAAGGCACTATGAGATCCTAATTGAAGATGTCAATCACATTGAGTCTGGTCGAGTCCCTTTCCCCAACTACAGAACAAGCACTAACAGCTAA | 255 | 0.4588 | MASNSMTSSRSSSSSWTPKQNKMFERALAKYDKDTPDRWQNVANAVGGKTADEVKRHYEILIEDVNHIESGRVPFPNYRTSTNS* | 85 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte11g00157 | 84 | ProSiteProfiles | Myb-like domain profile. | 8 | 62 | IPR001005 | - | |
| Pte11g00157 | 84 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Pte11g00157 | 84 | SMART | sant | 12 | 64 | IPR001005 | - | |
| Pte11g00157 | 84 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR-RELATED | 1 | 82 | IPR044636 | GO:0003700 | |
| Pte11g00157 | 84 | Pfam | Myb-like DNA-binding domain | 14 | 58 | IPR001005 | - | |
| Pte11g00157 | 84 | FunFam | Transcription factor SRM1 | 8 | 75 | - | - | |
| Pte11g00157 | 84 | ProSiteProfiles | SANT domain profile. | 11 | 66 | IPR017884 | - | |
| Pte11g00157 | 84 | Gene3D | - | 6 | 75 | - | - | |
| Pte11g00157 | 84 | CDD | SANT | 16 | 58 | IPR001005 | - | |
| Pte11g00157 | 84 | SUPERFAMILY | Homeodomain-like | 14 | 70 | IPR009057 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte11g00157 | Pte-Chr11 | 1948572 | 1950338 | Dispersed/Wgd |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | MYB-related | Pte11g00157 | Myb_DNA-binding | 9.3e-07 | CL0123 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte11g00157 | - | - | egr:104419733 | 139.043 |