Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00155 ATGGATAAGGAAATAGGAATGCCAAATACATTGGCTTATACACCACCTGTTCGGGATTTTTCCAAGCTACCTTCTTCTACTCAAGAGTATAGAAGTGATCAACCTGCTGCTCATTTCAGCTCCATCTTCAATCCCTCTGATCAAACCCTAGACCGCTATCATCTTTTTAGTCTTTCTTCTTCCCCTCCTCTACAATCAAGTCCCAATCAACAGGCTCACAGAGCCAGAAGAGGTTCAGAACCAACAACATCTCCACTTGCCTCCACAAGCGTAGGTGCCACAACGGTTTTAAACTCAAGAGCACTGCCATCATCGCCACAGCAGCCGGCAACAGGAACAACATTCTCAACCATTGACACTACCAGTACCAAACCCTCAATAAGTTATCGAGAATGTTTAAAAAATCATGCAGCAAGCGGTGGAGGTCATGTGGTGGACGGCTGTGGAGAGTTTATGCCGAGTGGGAAAGAAGGCAGCCCAGAAGCCTTGAGATGTGCTGCTTGTGAATGCCACCGCAATTTTCATAGGAAGGAAGTTGAGGGCGAACTTCGACACGTGTTCTATTGCTTCCATGGCTATAACCCCAACAAAAGCAACGATCTGAAAGATGGTTTCCCTTCCCCGCACCTTTCTCACCATCTTCATGCTCATTTTCCTCCATCTCCTTTTCACCAGCATCATAAATTCTATCACGGTCCCCTCACTCCTTCAGCAAGCCTCGTTCCACCGATGATGATGACTTTTGGAGAGGGTGGTAGTGCACAAGTAGAATCTTCAACTGAAGATCTCAACATTTTCCAGTCTAATGGTGGAGGGCAAATGCCAGTGCAGCCATCTTCGTCGAAAAAGCGTTTCAGAACAAAATTTACACAAGAACAAAAGGAGAAGATGATGGAATTCGCCGGCAAGCTGGGGTGGAGGATCCAGAAACATGACGAGGAGGAAGTGCGGCAGTTTTGTTCTCTAGTCGGCGTAAAAAGACATGTTTTGAAGGTCTGGATGCACAATAACAAGCAAGCTAAGAAGAATTGA 1032 0.4603 MDKEIGMPNTLAYTPPVRDFSKLPSSTQEYRSDQPAAHFSSIFNPSDQTLDRYHLFSLSSSPPLQSSPNQQAHRARRGSEPTTSPLASTSVGATTVLNSRALPSSPQQPATGTTFSTIDTTSTKPSISYRECLKNHAASGGGHVVDGCGEFMPSGKEGSPEALRCAACECHRNFHRKEVEGELRHVFYCFHGYNPNKSNDLKDGFPSPHLSHHLHAHFPPSPFHQHHKFYHGPLTPSASLVPPMMMTFGEGGSAQVESSTEDLNIFQSNGGGQMPVQPSSSKKRFRTKFTQEQKEKMMEFAGKLGWRIQKHDEEEVRQFCSLVGVKRHVLKVWMHNNKQAKKN* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00155 343 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 129 178 IPR006456 -
Pte11g00155 343 Pfam ZF-HD protein dimerisation region 127 179 IPR006456 -
Pte11g00155 343 MobiDBLite consensus disorder prediction 1 122 - -
Pte11g00155 343 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 129 179 IPR006456 -
Pte11g00155 343 MobiDBLite consensus disorder prediction 20 122 - -
Pte11g00155 343 Gene3D - 268 343 - -
Pte11g00155 343 FunFam Zinc-finger homeodomain protein 2 270 343 - -
Pte11g00155 343 NCBIfam homeobox domain, ZF-HD class 282 339 IPR006455 -
Pte11g00155 343 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 108 339 - -
Pte11g00155 343 SUPERFAMILY Homeodomain-like 270 342 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00155 Pte-Chr11 1928537 1932010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00155 122 342 ZF-HD Transcription Factor Family AT1G75240 48.936 9.83e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pte11g00155 ZF-HD_dimer 7.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00155 - - jre:108987183 321.242