Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00138 ATGAGAGTAACCAACGGCAGCAACAATAGTAACAGCCGTTCCCCAAACCCCAAACCCATCAACATCTCTGCCAACACTATTGTTCCCCGGAATATAGGCCACCTTCACAACCCCACCAATAATTCAAATTTGTGCTACGAACCCACCTCTGTGCTTGACCTACGTCGTAGTCCAAGCCCAGTGAGTGTTTCCGAAAAGCACACCGACCTTTCGGTCATAGCTGACAAGCTGTCAAAACCGGAAGACCCCCTTGAATTGGACGAGCATGTGCTGCACAATTTTGATTGGGATTCAGTCATGAAGGACCTGGGTTTGCATGACGAGTCAGCCAACTCCGTGTTCAAGAATTCCCTTCAATCAACCCTCTTCGAGGTTCAAGGTCCTCAACTGTCTGAATTCCCAATCAATCATGAGCCACCCGCCTTTGATCACCCCGATTTTATACTCTCTGAGGTCTATTCCAATCAAAATCTGGCTTACAACTACAGCCCTTTCGATCATTTGAGCCAAGGATTTCAACATCATCAAAGCAACTTGACAAACTTAGGTTTCGATTTTGTCCAAGAGCTTATCAAGGCAGCTGATTGCTTTGACACCAACGAGCTGCAACTGGCTCAGGTGATACTGGAGCGGCTCAACCATCGCCTCCGGTCTCCAACTGGGAAACCACTCCAGCGAGCCGGCTTTTACTTCAAAGAAGCACTCGAATCACTTCTATCCAATTCAAACCGGTCTCCGGGACTCTCCTCCTGGTCTGAAATTGTCCAGACCATCAGAACCTACAAGGCCTTCTCTGGGATCTCCCCAATTCCCATGTTTTCTCACTTCACCACTAACCAAGCTCTCCTGGAAGCGCTTAAAGGGTCTGCCTTCGTTCACATCATAGACTTTGATATCGGCCTTGGAGGTCAATACGCTTCTCTCATGAAAGAGATAGCTGAGAAGGCTGACGCCTGCAAAGTCAACCCACCAGTGCTTCGAATCACTGCTGTTGTCCTTGAAGATTACGCAGTTGAAAGTCGTTTGATCAAAGAGAACCTAACTCAATTCGCTCAAGAGCTCAGAATTAGATTCCAAGTAGAGTTCGTGCAGACACGTATTTTCGAGTCACTGTCGTTTAAAGCTGTGAAGTTCGTGGAAGGCGAGAAGTCCGCTGTTCTCCTATCCCCTGCAATCTTCCGCCGTTTGGGCTCCACCAACAATATTGGCGCTGTCCTCGGCGACATGCGTAGAGCTTCTCCAAGTGTAGTCGTTTTCGTCGACGGTGAAGGATGGACGGAAGGGACGGGGACAACGTCGTTTCGCAGGAATTTCGTGAACGGCCTCGAGTTCTACACGATGATGTTGGAGTCTCTAGATGCGTCAATGGCGGGAGGTGGTGGTGAGTGGATACGGAGGATCGAGATGCTTCTTTTGAAACCCAAGATATTAGGGACGGTAGAGGGTGCGGGAAGGCGGATTCCGCCGTGGAGGGAATTGTTTTACGGGGCGGGAATGAGGCCGGTTCAGTTAAGTCAGTTTGCTGATTTTCAAGCTGAGTGCTTGTTGGGGAAAGTACAGGTAAGGGGTTTCCACGTAGGAAAACGTCAGGCTGAGTTGGTGCTCTGTTGGCATGATCGGGCCATGATTGCCACTTCTGCTTGGCGGTATTAA 1653 0.4936 MRVTNGSNNSNSRSPNPKPINISANTIVPRNIGHLHNPTNNSNLCYEPTSVLDLRRSPSPVSVSEKHTDLSVIADKLSKPEDPLELDEHVLHNFDWDSVMKDLGLHDESANSVFKNSLQSTLFEVQGPQLSEFPINHEPPAFDHPDFILSEVYSNQNLAYNYSPFDHLSQGFQHHQSNLTNLGFDFVQELIKAADCFDTNELQLAQVILERLNHRLRSPTGKPLQRAGFYFKEALESLLSNSNRSPGLSSWSEIVQTIRTYKAFSGISPIPMFSHFTTNQALLEALKGSAFVHIIDFDIGLGGQYASLMKEIAEKADACKVNPPVLRITAVVLEDYAVESRLIKENLTQFAQELRIRFQVEFVQTRIFESLSFKAVKFVEGEKSAVLLSPAIFRRLGSTNNIGAVLGDMRRASPSVVVFVDGEGWTEGTGTTSFRRNFVNGLEFYTMMLESLDASMAGGGGEWIRRIEMLLLKPKILGTVEGAGRRIPPWRELFYGAGMRPVQLSQFADFQAECLLGKVQVRGFHVGKRQAELVLCWHDRAMIATSAWRY* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00138 550 ProSiteProfiles GRAS family profile. 177 549 IPR005202 -
Pte11g00138 550 MobiDBLite consensus disorder prediction 1 23 - -
Pte11g00138 550 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 152 544 IPR005202 -
Pte11g00138 550 Pfam GRAS domain family 187 549 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00138 Pte-Chr11 1796526 1798658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00138 84 551 GRAS Transcription Factor Family AT4G36710 55.852 1.48e-177 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte11g00138 GRAS 5.8e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00138 - - qsa:O6P43_024734 758.829