Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00137 ATGGGAATGAGGGAAGAGAATACTTCCAAGACTTCTAAAGCAGTAACTTCAATGCAGGAGATGCCTGCTACACCTTCATACCCTGATTGGTCAAACTCAATGCAGGCTTTTTATGGACACGGTGCCACTCCACCTCCATTTTTCCCATCAACAGTTACTTCTCCAACTCCCCACCCATATATGTGGGGAAGCCAGCACCCTTTAATTACTCCATATGGGACACCAGTTCCATATCCGGCTATCTACCCTCCTGGGACTGTGTTTGCTCATCCCAATATGGCCACGGCTCCAAATTCAGCACATGCCAATACAGACACTGAAGGGAGGGTAACTGATGGAAAGGACCGAGTTTCTGCAAAGAAGTATAAGGGGACTTCAGGACTTGCTGGTGGCAAGCTGGGAGACATTGGCAAGGCAGGCTCTGGGTCAGGAAATGACGGCATCTCACAAAGTGCAGATAGTGTTTCTGACTGCTCATCAGACGCTAGTGATGATAATAACAACCAACAGGAATCTACTGCAAATAAGAAGGGAAGTTTTGACCAGATGCTTGCTGATGGTGCCAATGCTGAAAATAATGCCACCGGTCCATCTTCAACTCATGTAAAGCCCATAGAGTCAACACCTGCGACTAATCTTAATATTGGTATGGATTTATGGAATGCATCGTCTGCTGGTAATGGTGCTAAAATGAGACAAAATACATCTGGTGCAGCAATGACAGTTGCTCCTTCAAACATGGGTCTGAATGACCAGTGGGTACAAGACGAGCGAGAACTAAAAAGGCAGAAGAGGAAGCAATCTAATAGAGAATCTGCTAGGAGATCAAGGTTACGTAAACAGGCTGAATGTGAAGAGTTGCAAAAAAGGGTGGAAGCACTGGGCAATGAGAATCGAACTCTCAGAGATGAGCTGCAAAGGCTCTCTGAAGAATGCAAGAAGCTTACATCAGAAAATAGTTCCATCAAGGAAGAGTTGGAACATATTTGTGGCTCAGATGAAGTCGCTAACCTTGAATAG 1020 0.4529 MGMREENTSKTSKAVTSMQEMPATPSYPDWSNSMQAFYGHGATPPPFFPSTVTSPTPHPYMWGSQHPLITPYGTPVPYPAIYPPGTVFAHPNMATAPNSAHANTDTEGRVTDGKDRVSAKKYKGTSGLAGGKLGDIGKAGSGSGNDGISQSADSVSDCSSDASDDNNNQQESTANKKGSFDQMLADGANAENNATGPSSTHVKPIESTPATNLNIGMDLWNASSAGNGAKMRQNTSGAAMTVAPSNMGLNDQWVQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVEALGNENRTLRDELQRLSEECKKLTSENSSIKEELEHICGSDEVANLE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00137 339 Gene3D - 260 315 - -
Pte11g00137 339 FunFam BZIP transcription factor 259 310 - -
Pte11g00137 339 SMART brlzneu 257 321 IPR004827 GO:0003700|GO:0006355
Pte11g00137 339 Pfam bZIP transcription factor 257 319 IPR004827 GO:0003700|GO:0006355
Pte11g00137 339 MobiDBLite consensus disorder prediction 226 250 - -
Pte11g00137 339 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 259 322 IPR004827 GO:0003700|GO:0006355
Pte11g00137 339 MobiDBLite consensus disorder prediction 186 210 - -
Pte11g00137 339 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 264 279 IPR004827 GO:0003700|GO:0006355
Pte11g00137 339 PANTHER G-BOX-BINDING FACTOR 3-RELATED 8 328 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pte11g00137 339 Pfam Coiled-coil N-terminus of APC, dimerisation domain 285 332 IPR032038 -
Pte11g00137 339 MobiDBLite consensus disorder prediction 107 121 - -
Pte11g00137 339 SUPERFAMILY Leucine zipper domain 260 316 IPR046347 GO:0003700|GO:0006355
Pte11g00137 339 Coils Coil 270 325 - -
Pte11g00137 339 CDD bZIP_plant_GBF1 262 312 IPR045314 GO:0003700|GO:0006355
Pte11g00137 339 MobiDBLite consensus disorder prediction 143 179 - -
Pte11g00137 339 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Pte11g00137 339 MobiDBLite consensus disorder prediction 1 25 - -
Pte11g00137 339 MobiDBLite consensus disorder prediction 94 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00137 Pte-Chr11 1783909 1789150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00137 1 339 bZIP Transcription Factor Family AT4G36730 55.294 1.57e-111 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte11g00137 MFMR 2.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00137 K09060 - qsa:O6P43_024732 459.914