Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00127 ATGGTTACAAGGATGGATTCTGTTGCTTTCACTGCTGTCTTCATTTTTGCAGTACTATGTTGTTCTCCTGCTGTTCTGTCACAGCAGCCTTACGTGGGGGAAGCCACGAGCGGCTGTGATAGCTCCGATAGTTCGAAGTCTATTCTTGGTTATACTTGTAATGGTTTCACCCCAACATGTCAAGCTTATCTTACTTTCAGATCACAACCACCATACAACTCTGTCTCTGCCATCTCTACTTTTTTTAGCGCCGACCCATTAGAGCTATCACAGTTGAATTCGGTTCCTCAGAACGCAACCTTTCCAACAAATAAGTTGGTGTTGATTCCACGCAGATGCTCTTGCTCCGGTGACAATTATCAGGCGAACACAAACTATACTATCCACAGTGGGGACACTTTGTTATGGATTGCCAATACTGTTTTCCAAGGCCTCTCAACCTGTCAAGCTATTCAGCATCAGAACAATATTACAGGTGATTTGATATTTGCTGGTATGAATATGACTGTTCCTCTAAGATGTGCCTGTCCTACTAGGAATCAAACAAATTCCGGAGTCAAATACTTACTAAGCTACTTGATAATAGAGGGTAATTCTGTTTTTGACATTAGTGAAAGATTTGATGCTGACAATGGATTGACTCTTGAAGCGAATGGCCTTCCAGCACTAGAACCCACAATTTATCCCAATACTACACTTCTGGTCCCTTTGAAAGTTCCACCTACAAGTTCTGATACTGTGGAAGAACCTCCTCCTCCACCCTCAGCTCCATTGCCTCCAGTTCCCTCCTCTGGAGGAAGCTCAAGTAAAAGCAAAACATGGATATACGTTCTTGTTGGAGTTCTAGCTGCTGCTTGTCTTGCAGTAACCTTAGGCTCTATTGTTTTCTTCAAGGTCTACCGTAAGAGGAGAAAGGAAAAGACTGCTCCTGTTGTTGATTTGGAGAGCTTTGAGGCTTATGAAAAACGTCAGGGTAAAAAGTTGCAGAAATCTGTTTCTTTCTCAAAGATGATAACAAGTTTGGCTCAATCCGTTAAAGTTTACAACTTTACCGAACTGCAGAATGCAACAGATAATTTCAGTCCAAGTTACTGGATTGGGGGATCTGTTTATCGTGGTATGATCAATAAGGATTTGGCTGCAATTAAAAAAGTGGATGCAGATGTCTCAAACGAGATCAGTTTACTGAACAAGATAAACCATTCAAATATCGTACGCGTTTTTGGGGTCAGTTTCAATGAAGGCCACTGGTATGTTGTTTATGAGTATGCTGCTAATGGACCTTTAAGTGATTGGATATATTTCAATAACATTGATGGGAAGTTCTTGAGTTGGACCCAGAGAATACAGATTGCATTGGATGTGGCCACAGGGCTCAATTATCTTCATTGTTTCACTTCCCCTTCACATGTTCATAAGAATTTGAACAGCGGTAATGTTCTTCTTGACAGCGACTTGAGGGCAAAGATAGCGAATTTCAGTTTAGCTAAATCTGCTGAAGGAGAGGATGGTGAATTCGCCTTGACACGACACATAGTTGGGACAAGAGGTTACATGGCTCCGGAGTACTTGGAAAATGGTTTAGTATCTGATAAGCTTGATGTATATGCTTTTGGAATTCTCATGCTGGAAATGTTAAGTGGAAAAGAGGTTTCTTCATTCTATTCGGAGGAAAACATAAACATATCAAATGTTCTGCACACCATTCTTGACGAAGAAGATAGAGAGGACAAATTAAAGAATTTCATGGATCCTTCATTGAAGAAAAACTATTCAACAGAACTCGGAATGTTTGTAATAAAGCTCGTCGATAGTTGCCTAAAAAAAGATCCTAGCGGTCGTCCTTCCATGGATGAGATTGTGCAATCTCTATCACTATCCCTAAACACCTCATATACTTGGGAGATGTCAGCCAGTGCAGCTGGAGAAAATGGTATTGGTGACAAGGTGAAAAATAGTGCATAA 1965 0.4087 MVTRMDSVAFTAVFIFAVLCCSPAVLSQQPYVGEATSGCDSSDSSKSILGYTCNGFTPTCQAYLTFRSQPPYNSVSAISTFFSADPLELSQLNSVPQNATFPTNKLVLIPRRCSCSGDNYQANTNYTIHSGDTLLWIANTVFQGLSTCQAIQHQNNITGDLIFAGMNMTVPLRCACPTRNQTNSGVKYLLSYLIIEGNSVFDISERFDADNGLTLEANGLPALEPTIYPNTTLLVPLKVPPTSSDTVEEPPPPPSAPLPPVPSSGGSSSKSKTWIYVLVGVLAAACLAVTLGSIVFFKVYRKRRKEKTAPVVDLESFEAYEKRQGKKLQKSVSFSKMITSLAQSVKVYNFTELQNATDNFSPSYWIGGSVYRGMINKDLAAIKKVDADVSNEISLLNKINHSNIVRVFGVSFNEGHWYVVYEYAANGPLSDWIYFNNIDGKFLSWTQRIQIALDVATGLNYLHCFTSPSHVHKNLNSGNVLLDSDLRAKIANFSLAKSAEGEDGEFALTRHIVGTRGYMAPEYLENGLVSDKLDVYAFGILMLEMLSGKEVSSFYSEENINISNVLHTILDEEDREDKLKNFMDPSLKKNYSTELGMFVIKLVDSCLKKDPSGRPSMDEIVQSLSLSLNTSYTWEMSASAAGENGIGDKVKNSA* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00127 654 Gene3D LysM domain 119 184 IPR036779 -
Pte11g00127 654 ProSiteProfiles Protein kinase domain profile. 285 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00127 654 SUPERFAMILY Protein kinase-like (PK-like) 340 624 IPR011009 -
Pte11g00127 654 MobiDBLite consensus disorder prediction 245 261 - -
Pte11g00127 654 Gene3D Phosphorylase Kinase; domain 1 329 423 - -
Pte11g00127 654 Gene3D Transferase(Phosphotransferase) domain 1 425 641 - -
Pte11g00127 654 MobiDBLite consensus disorder prediction 239 265 - -
Pte11g00127 654 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 11 637 - -
Pte11g00127 654 FunFam PTI1-like tyrosine-protein kinase 3 424 638 - -
Pte11g00127 654 Pfam Protein kinase domain 382 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00127 654 Pfam LysM domain 126 171 IPR018392 -
Pte11g00127 654 Pfam LysM domain 193 236 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00127 Pte-Chr11 1715950 1718521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00127 13 638 Receptor kinase-like Gene Family AT2G23770 44.674 2.43e-168 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pte11g00127 Pkinase 4.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00127 - - qsa:O6P43_024719 740.339