Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00126 ATGGCCTTTTTCTTCTTCTCCTTCCCAAAAGTTTATATCCTTCCAGTCGTGTTTGTTGCCTGCGGTGTTATTATGGCAGCTGAACCACCTTCCAACTCAAGTAACAATGGATACTATCCATGTCCTGCAACAACACTTTTTCCCTGTCAAACATATGTCGCATACATTGCCACTCCTGATCGGTTGAGTGTTTCAATAATAGCTGAGCTTTTTGGTACCACTACTGCATCCATTGCAAACGCCAGCAATTTAGTCTCAGAGACTGATGTGCTCATTCCAGGCCAAACCTTACTTATACCTATCTCATGTGGCTGCACTAGAAACCATTCTTTTGCCATGATTACCTACGAGATTCGGGAGGGTGATAGCTACTATTTACTCTCAACTGGTGCATTTCAAAACCTAACCACTTGGGAAGCAGTGGATGACTTCAACCCAGATCTGATTCCAACTCAATTGCCAGTTGGCGCCATAGTAACTATCCCTTTGTTTTGCAGGTGCCCCACAAAGGTTCTATCAGCAAAGGGCCTAAAGCATTTTATCACTTACGTATGGCAACACAGTGATGATCTTCAACGCGTGAGTGCGAAGTTTAGTGCTTCTCCTAAGGACATATTGGCTCGCAATAACCACAAGAATACTCGCTTTGGAGGGAACCAACGAATTCTGATCCCAGTAGCACGATTGCCCACATTATCTCAGCCTGCAGGGCGATCGCACAGAAAGGAAAAATCAAAACATATTTGGACAGGTCTTGCTATTATTTTGGCATGCATTATTATGATCGTAATTCTAATGATATTAGTGCGCTGTATTTGTCGAATGATAGTGATAAAGAAAACAGAGACTACACCAGAGAAAAGTGGTTCTTTTGAAAATGTTGACAAGCTGCTGTCGGGAATTTCAGGCTATTTAAGCAAGACAACGATGTTTGACATCAATGTGGTTTCGGAAGCTACCATGAATTTCAGTGAACGTTGTCAGATAGGAGGCACTGTGTATAGGGCCAAAATTGATGATCACCTATTGGCTGTGAAGAAAATCAAGGAAGACGTTTCAGAGGAGCTCCAAATTCTGAATAAAGTCAACCACGCAAATCTGGTAAAACTGATGGGCGTCTCCACCGATACCAATGGTGACTGTTACCTCGTGTATGAATACGCTGAAAATGGATCGCTTGATAAGTGGCTACGTCACAAGTCATCGTCCAATACAGACTCTAAGAACATCCTGGCTTGGAGTCAGAGGTTAAGCATAGCACTGGATGTGGCCATGGGCCTGCAATACTTGCATGAACACACGCTTCCCAGAATAGTACACAGGGACATCAGAACCAGTAATATACTTCTTGACTCCAAGTTTAAGGCTAAGATAGCGAATTTCTCCTTGGCCAGAACAACTACGAATCCTATCATGCCAAAGATAGATGTTTTTGCTTTTGGAGTTATTCTTATGGAGTTACTGACAGGGAAGAAAACTTTGAGAACGAAAGATAATGGGGAGGTAGTTATGCTGTGGAAGGACATGAAAGATATCTTTAAAGATGGAGAAAAAAAAGATGAGATGCTAAGAAGATGGATTGATCCACACTTGGAGGGAATGTATCCCGTTGACGAAGCTCTTAACTTAGCAGCTTTATCAATGGCCTGCACAGTTGAGAAGTCTATGTCAAGGCCAAACATGGCAGATATTGTTCTTGCCCTCTCTGTTATCCTTCACCCAAGTCCGACACCGTTAGAAAGATCCATAGATACAGATATAGTTATCACTTCGGTTAACGCTCGCTGA 1788 0.4256 MAFFFFSFPKVYILPVVFVACGVIMAAEPPSNSSNNGYYPCPATTLFPCQTYVAYIATPDRLSVSIIAELFGTTTASIANASNLVSETDVLIPGQTLLIPISCGCTRNHSFAMITYEIREGDSYYLLSTGAFQNLTTWEAVDDFNPDLIPTQLPVGAIVTIPLFCRCPTKVLSAKGLKHFITYVWQHSDDLQRVSAKFSASPKDILARNNHKNTRFGGNQRILIPVARLPTLSQPAGRSHRKEKSKHIWTGLAIILACIIMIVILMILVRCICRMIVIKKTETTPEKSGSFENVDKLLSGISGYLSKTTMFDINVVSEATMNFSERCQIGGTVYRAKIDDHLLAVKKIKEDVSEELQILNKVNHANLVKLMGVSTDTNGDCYLVYEYAENGSLDKWLRHKSSSNTDSKNILAWSQRLSIALDVAMGLQYLHEHTLPRIVHRDIRTSNILLDSKFKAKIANFSLARTTTNPIMPKIDVFAFGVILMELLTGKKTLRTKDNGEVVMLWKDMKDIFKDGEKKDEMLRRWIDPHLEGMYPVDEALNLAALSMACTVEKSMSRPNMADIVLALSVILHPSPTPLERSIDTDIVITSVNAR* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00126 595 ProSiteProfiles LysM domain profile. 53 99 IPR018392 -
Pte11g00126 595 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 32 575 - -
Pte11g00126 595 Pfam Protein tyrosine and serine/threonine kinase 348 468 IPR001245 GO:0004672|GO:0006468
Pte11g00126 595 SUPERFAMILY Protein kinase-like (PK-like) 310 568 IPR011009 -
Pte11g00126 595 Pfam LysM domain 64 100 IPR018392 -
Pte11g00126 595 ProSitePatterns Tyrosine protein kinases specific active-site signature. 438 450 IPR008266 GO:0004672|GO:0006468
Pte11g00126 595 Gene3D Phosphorylase Kinase; domain 1 298 387 - -
Pte11g00126 595 SMART tyrkin_6 323 568 IPR020635 GO:0004713|GO:0006468
Pte11g00126 595 Gene3D Transferase(Phosphotransferase) domain 1 470 572 - -
Pte11g00126 595 Gene3D Transferase(Phosphotransferase) domain 1 388 469 - -
Pte11g00126 595 ProSiteProfiles Protein kinase domain profile. 291 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00126 Pte-Chr11 1713419 1715696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00126 85 572 Receptor kinase-like Gene Family AT3G21630 31.743 1.97e-72 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte11g00126 PK_Tyr_Ser-Thr 1.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00126 - - qsa:O6P43_033758 644.425