Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00122 ATGCATTTGGAAAAATGGGTGCAGGATGATCTGGGAGATTTTGATGAAGAAGAAATTGACTGTGCAATCGCGTTGTCTCTTTCAGAGGTAGATCAAAAGGGGGAAAAAGTGATTGATGCAGAGGAAGAATCTAAAACAGAGGAAGTGGAAAGAGTGGCTAAAGTGGTAAAAGAAGCGGACAAGGAGGAAGAGGAGAAAGAGGAAGAAGAGGAGGAACATGAAGAAAAACAAGTTGCTAAAGTTGAAGAAGATGAAGAACTCTCTATATTGCAACCGGAGGAAATCGAACAGCTTGCCAGGGTTATTCAGGACAGTTTGAGCTCGGAATCTCCTCCTCAACATAACAGTGGATGTGGATCCATATTTCAACCGTATCCTTTCTTTTTTCCATCAAGTTACAGGGTTTGTGCAGGCTGCAAAGCCGAGATAGGTCATGGAAGATTTTTAAGTTGCATGGGTGCAGTACAGCATCCAGACTGCTTCTGTTGCCATTCTTGCAATCTACTGATCACAGATTATGAGTTCTCCATGTCTGGAGATCATCCTTACCATAAATCCTGTTACCGGGAGCAGCACCATCCAAGATGTGATGTTTGTAAAAACTTTATTCCAACAAATTCAGCTGGTCTTATTGAGTATAGAGCACATCCTTTCTGGATGCAAAAATACTGTCCATCACATGAACATGATGGTACTCCCCGTTGCTGTAGTTGTGAAAGAATGGAGCAAAGAGACACAAAATATCTTTTGCTTGATGATGGTCGAAAGTTATGTCTAGAGTGTGTAGACTCAGCAATTATGGACACTCATGAATGCCAGCCCCTTTAA 828 0.4179 MHLEKWVQDDLGDFDEEEIDCAIALSLSEVDQKGEKVIDAEEESKTEEVERVAKVVKEADKEEEEKEEEEEEHEEKQVAKVEEDEELSILQPEEIEQLARVIQDSLSSESPPQHNSGCGSIFQPYPFFFPSSYRVCAGCKAEIGHGRFLSCMGAVQHPDCFCCHSCNLLITDYEFSMSGDHPYHKSCYREQHHPRCDVCKNFIPTNSAGLIEYRAHPFWMQKYCPSHEHDGTPRCCSCERMEQRDTKYLLLDDGRKLCLECVDSAIMDTHECQPL* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00122 275 Coils Coil 45 86 - -
Pte11g00122 275 MobiDBLite consensus disorder prediction 38 61 - -
Pte11g00122 275 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 128 161 - -
Pte11g00122 275 CDD LIM_DA1 136 188 - -
Pte11g00122 275 SMART lim_4 135 187 IPR001781 -
Pte11g00122 275 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 163 217 - -
Pte11g00122 275 MobiDBLite consensus disorder prediction 38 85 - -
Pte11g00122 275 FunFam Protein DA1-related 1 130 189 - -
Pte11g00122 275 ProSiteProfiles LIM domain profile. 134 194 IPR001781 -
Pte11g00122 275 PANTHER PROTEIN DA1-RELATED 2 60 275 IPR045218 -
Pte11g00122 275 Gene3D Cysteine Rich Protein 131 195 - -
Pte11g00122 275 Pfam LIM domain 136 191 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00122 Pte-Chr11 1684484 1686772 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte11g00122 LIM 1.5e-05 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00122 - - qsa:O6P43_033761 376.711