Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00084 ATGGCTGTGGAGCTCATGATGGGTTACAAGAACGATAAATTCACAGCCAAAGTGGAAGAGAATGTGGTTCAGGAAGCTGCTTCTGGCTTAGAGAGCGTTGAGAAGTTGATAAGATTGCTCTCCCAGAGTCAGCAACAATACGAATCCTATTCTCCATCAACTTCTAAGCCATCCATGGAAATCGAGATGGACTGTCAAGCTATGGCCGACGCCGCTGTGTCCAAGTTCAGAAAGGTGATTTCTCTTCTGGGTCGGACCAGAACGGGCCATGCCCGATTTAGAAGAGCACCTCTGGGACTGAACACTTCTCCTGTAACACAGATTAACACTGCAGAGCTACAATCATCCGACACTAAAGTGTATTATCCAACCCCGGTACAACAGATCCCACCAGCTCGACAACATCCCCAAGCTCTCTATGACCATCTATTGATATCCAAACCTGCAAAAATTGAGGGGAAGGACTCATCCAAGACCCTAAATTTCACATATTCCTCTGCTGCAAACTCATTCATTTCATCGTTGACTGGGGACACAGATAGCAAGCAGTTCTCTTCATCTTCACATCAGATAAACAATCTATCTCAGGTCTCTTCAGCCGGAAAGCCGCCTCTATCTTCGTCTTCTTTTAAAAGGAAGTGTAGCTCCGAGAAAATAGGGTCTGGCAAGTGTGGTAGTTCCTCTGGACCCTGTCATTGCTCAAAAAAAAGAAAATTGAGGTTGAAGAGAGTAGTAAGAGTTCCTGCCATAAGCTTGAAGATGGCTGATATACCACCAGACGACTATTCATGGAGAAAGTATGGTCAGAAACCAATTAAGGGTTCACCTCATCCAAGGGGTTATTACAAGTGCAGCAGTGTTAGAGGATGTCCAGCCAGGAAACATGTGGAGCGAGCTCTAGATGATCCATCCATGCTTGTCGTAACCTACGAAGGAGAACACAACCATTCACTCAACGTGGCCGAAACATCAGATCTCATACTAGAATCTTCATAG 996 0.4538 MAVELMMGYKNDKFTAKVEENVVQEAASGLESVEKLIRLLSQSQQQYESYSPSTSKPSMEIEMDCQAMADAAVSKFRKVISLLGRTRTGHARFRRAPLGLNTSPVTQINTAELQSSDTKVYYPTPVQQIPPARQHPQALYDHLLISKPAKIEGKDSSKTLNFTYSSAANSFISSLTGDTDSKQFSSSSHQINNLSQVSSAGKPPLSSSSFKRKCSSEKIGSGKCGSSSGPCHCSKKRKLRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLNVAETSDLILESS* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00084 331 SMART WRKY_cls 258 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte11g00084 331 MobiDBLite consensus disorder prediction 182 212 - -
Pte11g00084 331 FunFam WRKY transcription factor 65 242 319 - -
Pte11g00084 331 Pfam Plant zinc cluster domain 211 256 IPR018872 -
Pte11g00084 331 SUPERFAMILY WRKY DNA-binding domain 255 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte11g00084 331 ProSiteProfiles WRKY domain profile. 253 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte11g00084 331 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 21 320 IPR044810 GO:0003700
Pte11g00084 331 Pfam WRKY DNA -binding domain 260 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte11g00084 331 Gene3D WRKY domain 246 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00084 Pte-Chr11 1300482 1301808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00084 1 316 WRKY Transcription Factor Family AT2G24570 45.260 1.38e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte11g00084 WRKY 3.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00084 - - qsa:O6P43_033850 439.499