Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00080 ATGAGTTCGCAAAGTCTTGATTTCCATTTATGGTGGGGAACTTGTTCACTCATTTTTCTTTTTCATCGTACCCTTGGACTAAACACGGATGGTTCGTTGTTGCTATCGTTTAGATATTCAGTTCTCAATGATCCTCTGGGTGTACTTGAAAGCTGGAATTACACACACGAGACTCCATGTTCATGGAGAGGAGTTACATGTGCACAGACGGCAACTTCCAATGTGACTAACAACACAGTTTTTCGTGTAATTGGCTTAGCTCTCCCAAATTCTCAGCTTCTGGGTCCGATTCCTGCGGATTTGGGTCACATCGAACACCTCCAAAGTCTTGACCTCTCAAACAATTCATTCAATGGATCTCTGCCAGATTTGCTTTTCAACTCTACAGAGCTTTGGTTTCTTGATTTTTCCAACAATTTGATTTCAGGAGAGATTCCTAGCTCCATAGACAACCTGAGAAACCTTCAATATCTTAACCTCTCTAACAACGCCTTGGCTGGAAATGTACCTAGCAATCTGACATCTGTGCAAACTCTAACCGTTGTTTCACTGAAGAACAATTACTTGTCTGGTACTCTTCCGAGTGGATTTGATGCAGTTAAAGTATTAGACATGTCTTCCAATTTGATTAGTGGATCTCTGCCTCCAGATTTTGGGGGTGCCAGTTTACGTTTCTTGAACTTGTCTTACAATAGGCTATCTGGTGAAATCCCACCAGAATTTGCAAAGAAGATCCCAGGAAATTCAACCATTGATCTCTCGTTCAACAACCTAACGGGTGCAATTCCGAATTCTATTGTTTTCATGAATCAAAATTCCAAATCCTTCTCTGGAAATTCTGATCTTTGTGGAGAACCATCGAGAAGTCCATGTCCTATTCCTTCTTCGCCATCCTATGCCCCCAACGGTCCAACATCCCCTCCAGCATTTGCTGCTTTTCCAAAGACATTAGATTCTCCTTCAGATACTAACAATTCACAAGGACCGGCAAGTGGGTCTCCTCACCCAAAGCAAAACGGGCTAAGACCTAAGACGATTGTAGGAATTGTATTGGGGGATTTAGGAGGCATTACGGTATTGGCTTTGGTTTTCATGTACGTGTACCAAATGAAGAGAAAGAAAATAGTTGAAAATGCGTCCAAGCAGGAAGCTACAACGGCACATAGTGATCTGTCGTCGTCATCCTCCGAGTCGAGAGGGTTTGCCAGATGGTCGTGCTTGCGTAAAAGAACTGAAGATGGTGAGAGCTCTGAAACTGCTGCCTCTTCTGACACTGAAGAGGAACCAACCAGTCGAAAGGGACATGAAAACAGAGAGCAGCCGGAACAACAAAGTAAAGGAGGTACATTGGTAACTGTGGATGGAGAAAAACAGCTTGAACTTGAGACACTGCTAAGGGCTTCCGCTTACATATTGGGTGCGACTGGTTCAAGCATTATGTACAAAGCTGTGCTTGAAGACGGTAATACATTAGCAGTTCGTAGAATTGGTGAGAACAATCTGGAGAGATTCAAAGATTTCGAAAACCAGGTCCGCGCCATTGCCAAATTGGTGCACCCCAATTTGGTTCGTATTCGTGGCTTCTTCTGGGGTGTCGATGAGAAGCTCATCATCTATGACTTTGTTCCAAATGGTTGCCTTGCCAATGCTCGTTACAGGAAGGTGGGCTCTTCCCCCTGCCATCTCCCATGGGATGTGCGGCTCAAGATAGCAAGAGGAGTGGCACGTGGGCTGGCTTACCTCCACGAGAAGAAGCACGTGCATGGAAATTTGAAGCCGAGCAATGTTCTACTGGGTAGTGACATGGAGCCCAAGATAGGAGACTTCGGTCTTGAGAGGCTTCTAACGGGAGAAGCAAGCTATAAAGCTGGAGGGTCGGCCCGAACTTTTGGCAGCAAGAGATCTACAGTATCACGTGAGAGCTTTCATGACTTCACGTTTGGGCCTAGTCCAAGCCCAAGTCCTAGCTCAATTACTGGTGTCTCCCCGTATCATGCACCTGAATCGTTGAGAAGCATTAAGCCTAATCCAAAATGGGATGTCTACTCGTTTGGAATGATATTGCTCGAGTTACTAACAGGGAAAGTGGTTGTTTTGGATGAAATGGGACAAGCAAATGGGCTTTTAGTTGAAGACAATGCCCGGGCTTTGCGTATGGCTGATATGGCAATCCGGGCTGATGTGGAAGGCAAAGAGGAGACCCTTTTGGCTTGCTTCAAGTTAGGCTATAGCTGCGTCACTCCACTACCCCAGAAAAGGCCAACAATGAAAGAGGTTCTGCAGGTACTCGAAAAGATTCCGTCGACGCAGAACTACTATGGAAATTAG 2328 0.4523 MSSQSLDFHLWWGTCSLIFLFHRTLGLNTDGSLLLSFRYSVLNDPLGVLESWNYTHETPCSWRGVTCAQTATSNVTNNTVFRVIGLALPNSQLLGPIPADLGHIEHLQSLDLSNNSFNGSLPDLLFNSTELWFLDFSNNLISGEIPSSIDNLRNLQYLNLSNNALAGNVPSNLTSVQTLTVVSLKNNYLSGTLPSGFDAVKVLDMSSNLISGSLPPDFGGASLRFLNLSYNRLSGEIPPEFAKKIPGNSTIDLSFNNLTGAIPNSIVFMNQNSKSFSGNSDLCGEPSRSPCPIPSSPSYAPNGPTSPPAFAAFPKTLDSPSDTNNSQGPASGSPHPKQNGLRPKTIVGIVLGDLGGITVLALVFMYVYQMKRKKIVENASKQEATTAHSDLSSSSSESRGFARWSCLRKRTEDGESSETAASSDTEEEPTSRKGHENREQPEQQSKGGTLVTVDGEKQLELETLLRASAYILGATGSSIMYKAVLEDGNTLAVRRIGENNLERFKDFENQVRAIAKLVHPNLVRIRGFFWGVDEKLIIYDFVPNGCLANARYRKVGSSPCHLPWDVRLKIARGVARGLAYLHEKKHVHGNLKPSNVLLGSDMEPKIGDFGLERLLTGEASYKAGGSARTFGSKRSTVSRESFHDFTFGPSPSPSPSSITGVSPYHAPESLRSIKPNPKWDVYSFGMILLELLTGKVVVLDEMGQANGLLVEDNARALRMADMAIRADVEGKEETLLACFKLGYSCVTPLPQKRPTMKEVLQVLEKIPSTQNYYGN* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00080 775 CDD STKc_IRAK 472 766 - -
Pte11g00080 775 MobiDBLite consensus disorder prediction 278 341 - -
Pte11g00080 775 SUPERFAMILY L domain-like 37 286 - -
Pte11g00080 775 Gene3D Phosphorylase Kinase; domain 1 432 541 - -
Pte11g00080 775 PRINTS Leucine-rich repeat signature 152 165 - -
Pte11g00080 775 PRINTS Leucine-rich repeat signature 107 120 - -
Pte11g00080 775 Gene3D Ribonuclease Inhibitor 27 197 IPR032675 -
Pte11g00080 775 Pfam Leucine Rich Repeat 222 242 IPR001611 GO:0005515
Pte11g00080 775 MobiDBLite consensus disorder prediction 425 442 - -
Pte11g00080 775 SUPERFAMILY Protein kinase-like (PK-like) 471 767 IPR011009 -
Pte11g00080 775 ProSiteProfiles Leucine-rich repeat profile. 106 128 IPR001611 GO:0005515
Pte11g00080 775 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 86 765 - -
Pte11g00080 775 ProSiteProfiles Protein kinase domain profile. 466 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00080 775 Gene3D Transferase(Phosphotransferase) domain 1 543 773 - -
Pte11g00080 775 FunFam Leucine-rich repeat receptor-like protein kinase 200 293 - -
Pte11g00080 775 Pfam Protein kinase domain 472 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00080 775 MobiDBLite consensus disorder prediction 317 334 - -
Pte11g00080 775 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 27 199 - -
Pte11g00080 775 MobiDBLite consensus disorder prediction 645 663 - -
Pte11g00080 775 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Pte11g00080 775 Gene3D Ribonuclease Inhibitor 198 293 IPR032675 -
Pte11g00080 775 MobiDBLite consensus disorder prediction 290 308 - -
Pte11g00080 775 MobiDBLite consensus disorder prediction 409 449 - -
Pte11g00080 775 MobiDBLite consensus disorder prediction 645 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00080 Pte-Chr11 1274912 1278292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00080 16 776 Receptor kinase-like Gene Family AT4G37250 59.264 0.0 864
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte11g00080 Pkinase 1.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00080 - - qsa:O6P43_024597 1088.17