Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00076 ATGGCACATGACAAAGTGGGAGCTGATAAGAGAAAACGAAAGCGAGCGGCAGAACGTATTCTCGCATGCATCCGAAAGAGGCAGAAGACAATTGATTCTGGTTCAATTAAAATTGTTCGCGGTCAAGCTCGTCGGACAAGTAATGATAAAAAAATGAAGGACCAGGTCGTTGTGGATAGATGCAATCAAGAATGCTTAAAAACTTGGAGAGGTATCGAAAAGGAGCTTCTCAGAAAAGGGGTTGAAATTTTTGGAGAAAGCAGTTGCTTCATTTCAAGGAATGTCTTGAATGGCCTGAAGACATGTAGTGAGGTCTTCCATTACTTAAACTGGCACGAGGGCAAGGAGTTCGATCCTTCAAATCCTCTTCGGGATGGAGCAAAAGTGCGATCAAGAATGTTGCGTAGAAGAAGAAGAGGACGTTGGAGGCGTACTTATAGATCCACTGCTATACTTAGGAAGAGGAGAGCACAAAGAAATCAGCATCACATCCTGCAATATATTCCATGTCTTTGCAAATCCTCTTGTAAGACGATGTGCTCCTGTGAGCAGGTTCAAAAACGCTGTGAGAAATATTGCGGATGCGCAAAAACTTGCAGGAGCCGATTTCGGGGTTGCCATTGTGCTAGAAATCAATGTAGAAGCTCTCAATGTCCATGCTTTGTCGCTAATAGGGAATGCGATCCAGATCTTTGTGCAAATTGTTGGATCAGCTGCGGCGATGGCACTCTTACAAGTCCCATGATAACAGATCCTACACATGAATGTACAAATATGAAGATGCTCTTGAAACAGCACCAGAAGATTTTACTTGGAAAATCACATTCTTGGGGATGGGGAGCTTTCGTAAAGGATAGCGTGGAACGGGGCACATACCTTGGTGAATACGTTGGGGAATTGATTTCACATGATGAAGCTGAAAGACGGGGAAGGCTATATGACAGGGGAGATGCATCCTACCTCTTCACCCTGGATGATCAGCATGAAATTGATGCTTACAGAGTGGGAAACAAGTTAAAATTTGCAAACCATTCGATGAATCCGAATTGTTATGCCAAGATTCTTCTGGTTGCTGGAGATTACAGGGTCGGCATATTTGCTGATGAGCAAATAGACGCCAGAGAGGAACTGTTCTACGACTATGGTTATTCACTAGATACTGCACCAGCTTGGTTTAAGAAGCTCGCCGCATCTTGTGGTTCAAAGAAGAAGAAGCATCCGCATCGTGCTTCTTCCAGTAGGGGTCGTGCTAGAAACGTGCATAACCTCTAA 1272 0.4403 MAHDKVGADKRKRKRAAERILACIRKRQKTIDSGSIKIVRGQARRTSNDKKMKDQVVVDRCNQECLKTWRGIEKELLRKGVEIFGESSCFISRNVLNGLKTCSEVFHYLNWHEGKEFDPSNPLRDGAKVRSRMLRRRRRGRWRRTYRSTAILRKRRAQRNQHHILQYIPCLCKSSCKTMCSCEQVQKRCEKYCGCAKTCRSRFRGCHCARNQCRSSQCPCFVANRECDPDLCANCWISCGDGTLTSPMITDPTHECTNMKMLLKQHQKILLGKSHSWGWGAFVKDSVERGTYLGEYVGELISHDEAERRGRLYDRGDASYLFTLDDQHEIDAYRVGNKLKFANHSMNPNCYAKILLVAGDYRVGIFADEQIDAREELFYDYGYSLDTAPAWFKKLAASCGSKKKKHPHRASSSRGRARNVHNL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00076 423 Pfam SET domain 278 382 IPR001214 GO:0005515
Pte11g00076 423 ProSiteProfiles CXC domain profile. 148 252 IPR026489 -
Pte11g00076 423 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 8 405 IPR045318 GO:0006338|GO:0042054
Pte11g00076 423 SMART set_7 267 388 IPR001214 GO:0005515
Pte11g00076 423 FunFam Putative histone-lysine N-methyltransferase EZH2 167 384 - -
Pte11g00076 423 Gene3D SET domain 167 384 IPR046341 -
Pte11g00076 423 SUPERFAMILY SET domain 144 401 IPR046341 -
Pte11g00076 423 ProSiteProfiles SET domain profile. 267 382 IPR001214 GO:0005515
Pte11g00076 423 Pfam CXC domain 205 236 IPR041355 -
Pte11g00076 423 CDD SET_EZH 267 383 - -
Pte11g00076 423 SMART CXC_2 201 238 IPR033467 -
Pte11g00076 423 MobiDBLite consensus disorder prediction 402 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00076 Pte-Chr11 1175339 1178776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00076 268 382 C2H2 Transcription Factor Family AT2G23740 31.818 2.68e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte11g00076 SET 2.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00076 - K11430 gmx:100809840 432.95