Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00074 ATGTGGGATCTCAATGACTCGCCTGACCAGAGATTTGTTGACGACGAATCAGAAGAAGGATATTCTTCCCAGAAAACCTCTGTTGATGGAGACGACGATAAAGGCAAACGCGTTGGATCCGTTTCCAATTCAAGCTCGTCTGCTGTAGTAGTAGAGGACGGATCAGATGAAGAAGCTGATGCAGAGGGGAACAAGCCTTTGAGGAAGCGAGGCAGTAAGATATTCGGCTTCTCTATGGACTTTGAGAATTCTATGGACGGTAGTCCACTAGTGACCCGGCAATTTTTCCCCGTCGATGATTCTGACCAAGCTGTTGCAACAAGTGGAGAGGTCGGCGGTGCCGGTGGACTCAACGCCCCTGATTTCCCACGAGCTCACTGGGTTGGTGTAAAATTCTGTCAATCAGACCCACTTGTCATTGGAAAGCCACAAGAAGCGTCGCAGCAGCCTATGAAGAAAAGTCGGAGAGGGCCAAGGTCAAGAAGCTCACAGTATAGGGGAGTCACTTTTTACAGAAGGACCGGTCGATGGGAGTCTCACATATGGGATTGCGGAAAACAAGTTTATCTGGGAGGATTTGACACAGCACACGCAGCTGCTCGTGCATATGATCGTGCTGCCATTAAGTTCAGAGGTGTAGACGCAGACATAAACTTCAATATTGAAGATTATGAAGAAGACTTGAAGCAGATGAGTAATCTCACCAAGGAAGAGTTTGTGCATGTTCTTCGTCGCCAAAGCACTGGATTTCCAAGAGGAAGCTCTAAATATAGAGGTGTGACCTTGCATAAGTGTGGCAGATGGGAAGCACGAATGGGCCAATTTTTGGGCAAAAAATACGTTTATTTGGGATTATTTGATACGGAAATAGAAGCTGCAAGGGCTTATGACAAAGCAGCTATTAAGTGCAATGGTAAAGACGCTGTAACCAACTTTGATCCAAGTATATATGATGATGAGCTTAACTTAGACGCCTCTGGTGATCATGCTGCTGCTGATCATCACAACCTGGATTTGAGTTTGGGTAATTCAAGTTCCAAGAACCGTAAAGCTGTGACTGAATGCCATTCTTCATCTTTTCCATCTCAAACAGATTGGAGGAACGGGGTATCGATGCCTGAGGAGCAAACGTGTCGGAGTGAAACAATGGAAGCTCGTGCAAGAGCTGGGTGCAATGAGACTGAAACCAGGCGACTTCTTAGTCAAACACACCTTCAGTCGTCAACCCCTAGTGATATGCAAAGATATGGACACTATATGAGGTCTGGAGAGCCACAGCTGGTTCATAGTTTAACGCCAGATCTTCATCTACATGCTCCAAACTTTCTTATGCAGTTCCCAAGCAGCAGTAATGAAGGACGGATTGGAAATGATCTTATGGCAGATCGACCGTGGCAATCCCGACCTCTTCTTTTTGCATCTGCTGCAGCATCATCAGGATTCCCACAGAATGTTAGACCTTCCCAAAATTGGCTGCAGAAAAATGGATTCCATTCTCTAATGAGACCCACTTAA 1515 0.4594 MWDLNDSPDQRFVDDESEEGYSSQKTSVDGDDDKGKRVGSVSNSSSSAVVVEDGSDEEADAEGNKPLRKRGSKIFGFSMDFENSMDGSPLVTRQFFPVDDSDQAVATSGEVGGAGGLNAPDFPRAHWVGVKFCQSDPLVIGKPQEASQQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPSIYDDELNLDASGDHAAADHHNLDLSLGNSSSKNRKAVTECHSSSFPSQTDWRNGVSMPEEQTCRSETMEARARAGCNETETRRLLSQTHLQSSTPSDMQRYGHYMRSGEPQLVHSLTPDLHLHAPNFLMQFPSSSNEGRIGNDLMADRPWQSRPLLFASAAASSGFPQNVRPSQNWLQKNGFHSLMRPT* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00074 504 MobiDBLite consensus disorder prediction 1 69 - -
Pte11g00074 504 SUPERFAMILY DNA-binding domain 163 221 IPR016177 GO:0003677
Pte11g00074 504 ProSiteProfiles AP2/ERF domain profile. 256 313 IPR001471 GO:0003700|GO:0006355
Pte11g00074 504 MobiDBLite consensus disorder prediction 140 165 - -
Pte11g00074 504 Gene3D AP2/ERF domain 255 314 IPR036955 GO:0003700|GO:0006355
Pte11g00074 504 Gene3D AP2/ERF domain 163 222 IPR036955 GO:0003700|GO:0006355
Pte11g00074 504 Pfam AP2 domain 164 212 IPR001471 GO:0003700|GO:0006355
Pte11g00074 504 Pfam AP2 domain 255 304 IPR001471 GO:0003700|GO:0006355
Pte11g00074 504 FunFam AP2-like ethylene-responsive transcription factor 163 222 - -
Pte11g00074 504 PRINTS Ethylene responsive element binding protein signature 295 315 IPR001471 GO:0003700|GO:0006355
Pte11g00074 504 PRINTS Ethylene responsive element binding protein signature 257 268 IPR001471 GO:0003700|GO:0006355
Pte11g00074 504 MobiDBLite consensus disorder prediction 8 38 - -
Pte11g00074 504 CDD AP2 255 315 IPR001471 GO:0003700|GO:0006355
Pte11g00074 504 SUPERFAMILY DNA-binding domain 255 315 IPR016177 GO:0003677
Pte11g00074 504 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 89 401 - -
Pte11g00074 504 FunFam AP2-like ethylene-responsive transcription factor 255 315 - -
Pte11g00074 504 ProSiteProfiles AP2/ERF domain profile. 164 220 IPR001471 GO:0003700|GO:0006355
Pte11g00074 504 CDD AP2 164 221 IPR001471 GO:0003700|GO:0006355
Pte11g00074 504 SMART rav1_2 256 319 IPR001471 GO:0003700|GO:0006355
Pte11g00074 504 SMART rav1_2 164 226 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00074 Pte-Chr11 1151986 1155755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00074 1 505 AP2-EREBP Transcription Factor Family AT4G36920 52.571 5.61e-139 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte11g00074 AP2 3.4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00074 K09284 - qsa:O6P43_024617 614.764