Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00055 ATGAGCTGCAATGGTTGCCGTGTTCTGCGAAAGGGTTGCAGTGGATCTTGTATTTTACGACCTTGCTTGCAGTGGATTGAAAGCCCCGAAGCTCAAGGCCAAGCTACCGTTTTCGTTGCCAAGTTCTTTGGCCGTGCCGGCCTAATGTCCTTCATCTCTAGCGTTCCCGAAAATCAAAGACCTGCTTTATTTCAGTCTCTTTTGTTTGAAGCCTGTGGAAGAACGGTCAACCCCGTGAACGGTGCTGTAGGGCTTTTGTGGACCGGCAACTGGCACATCTGCCAAGCAGCTGTGGAGACCGTGCTCCGGGGAGGCGCTTTACGCCCGATGCCGGAGCTTCTTGGCCTTGATATTCAAACTTGCTTAATCGATGAGGTCTCCGAGGCGGAAGTTACCTGCACAGACGAAATGAGGCGACCTGATCTGAACCCCAAGCTTACAAGCTCGATACGGCACGTCAACAAAGTCCCCGAGAAACGAAAGCGATCTGATGAAAACTTGCAGCTTCAGATGGCCGATCTCGATCTTCGGCTGACACCAAGCTTTTCCCTGAAACCATCAATCTGTAACGAGCTATACAAGCGTGAAACCCGTCGTCCGGGCACGCCATCGATGAACTCGGAGGAATCGGGAACTACCACGGCGTGTTTTGACAGCAGTGGTGAAGATCGAAAGCTTCTCAACCTTTTCATTTGA 696 0.5158 MSCNGCRVLRKGCSGSCILRPCLQWIESPEAQGQATVFVAKFFGRAGLMSFISSVPENQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGALRPMPELLGLDIQTCLIDEVSEAEVTCTDEMRRPDLNPKLTSSIRHVNKVPEKRKRSDENLQLQMADLDLRLTPSFSLKPSICNELYKRETRRPGTPSMNSEESGTTTACFDSSGEDRKLLNLFI* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00055 231 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Pte11g00055 231 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Pte11g00055 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 230 - -
Pte11g00055 231 MobiDBLite consensus disorder prediction 195 218 - -
Pte11g00055 231 MobiDBLite consensus disorder prediction 203 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00055 Pte-Chr11 985211 986884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00055 1 232 AS2 family AT5G67420 55.642 3.39e-82 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte11g00055 LOB 1.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00055 - - qsa:O6P43_024565 326.25