Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00040 ATGAAGCGTGCGCATAATCATACTTCCAATAACCATAATATGTCGTTGGGATTCTGTGTTTCTCCTGAAATGAACATCCATGTTGCTTCCGACGCTCGCGAGCTTCACCAGACACAGCCTTTTTCTTCCGCTGCAGCTGCATCAGCAGGGCCAGCATCTTCACCGAGTATTTTACACTTCCTGCCTTCTACGAACTACGGGATATCTTGTGGTCAAAACAGTAGCTTTTATTCCTCAGTGTCTCTAATGCCTCTCAAGTCTGATGGATCTCTTTGTTTACCGGAAGCTCTTAACAAGTCACAGTCACAAGCACTAGTTGCAGCTTCAGCTCCAAAACCGGAAGACTTTTTTGGTGGCGGCACCCATCAATATGAATGCAATAAATTTAGCAGAGATGGAATGCTTTTGAGTTTAGAGAGAGTGATTGACCATCCATCTTCTCAAGAAAGAGGCGAAAAGTCAAGAAACCAAGAACAAGGCCAGTATACTTACTATTCTGGCTTTATTTGCCATAATGGAATGAACAGAATGACAGAATTGGAAAAGCAAAAGCGGGTATCTCATCTAAACTTTCAGGTAGCACAACCAGCTACCACTGAGAATGGAAACCCATCTGGCCCAAAAAGCTGGGCCTTGGGGAGCTATTTGGTGAATCATGTAGATGTAGCAGATCAGAGAATGGTTGGCTTTTCAGATGAAAATGGAGAAATGCAATCGTTAAACTTGTCCGTGAGCCCTGGCTCTCAATCAAGCTGTGTTACCGGTATACAGCATACACATACAAATGTGACGGATTCTATCTCCATGGATAAAAAGAAAAGGAGTCCAGCTGGAAGGTCGGCTACGAAGCAAATTGTTCATAGAAAATCCTTGGATACTTTTGGACAAAGAACGTCCCAGTATAGAGGTGTTACAAGGCATAGATGGACTGGCAGATATGAAGCCCATCTGTGGGATAATAGCTGCAAGAAAGAGGGTCAGACTAGGAAAGGAAGGCAAGGTATATATGCTTCACAACTTCATTCGATTTATTTAGGGGGGTATGATATGGAAGAAAAAGCTGCAAGGGCTTATGATCTGGCTGCACTCAAGTATTGGGGGTCCTCCACTCATATCAATTTTCCATTGGAAAACTACAACAAAGAACTCGAAGAAATGAAGAATATGTCAAGGCAAGAATATGTGGCTCATTTAAGGAGGAAAAGTACTGGATTCTCGAGAGGTGCTTCCATATACAGAGGAGTAACGAGACATCACCAGCATGGACGATGGCAAGCTAGGATTGGCAGGGTAGCTGGGAACAAAGATCTCTATCTGGGAACATTTAGTGAGTTTCTTCGTTCAATCTAA 1350 0.4311 MKRAHNHTSNNHNMSLGFCVSPEMNIHVASDARELHQTQPFSSAAAASAGPASSPSILHFLPSTNYGISCGQNSSFYSSVSLMPLKSDGSLCLPEALNKSQSQALVAASAPKPEDFFGGGTHQYECNKFSRDGMLLSLERVIDHPSSQERGEKSRNQEQGQYTYYSGFICHNGMNRMTELEKQKRVSHLNFQVAQPATTENGNPSGPKSWALGSYLVNHVDVADQRMVGFSDENGEMQSLNLSVSPGSQSSCVTGIQHTHTNVTDSISMDKKKRSPAGRSATKQIVHRKSLDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGIYASQLHSIYLGGYDMEEKAARAYDLAALKYWGSSTHINFPLENYNKELEEMKNMSRQEYVAHLRRKSTGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSEFLRSI* 450
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00040 449 ProSiteProfiles AP2/ERF domain profile. 300 375 IPR001471 GO:0003700|GO:0006355
Pte11g00040 449 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 112 443 - -
Pte11g00040 449 SUPERFAMILY DNA-binding domain 299 377 IPR016177 GO:0003677
Pte11g00040 449 PRINTS Ethylene responsive element binding protein signature 301 312 IPR001471 GO:0003700|GO:0006355
Pte11g00040 449 PRINTS Ethylene responsive element binding protein signature 357 377 IPR001471 GO:0003700|GO:0006355
Pte11g00040 449 SMART rav1_2 411 448 IPR001471 GO:0003700|GO:0006355
Pte11g00040 449 SMART rav1_2 300 381 IPR001471 GO:0003700|GO:0006355
Pte11g00040 449 FunFam AP2-like ethylene-responsive transcription factor ANT 299 377 - -
Pte11g00040 449 Gene3D AP2/ERF domain 411 445 IPR036955 GO:0003700|GO:0006355
Pte11g00040 449 Gene3D AP2/ERF domain 299 377 IPR036955 GO:0003700|GO:0006355
Pte11g00040 449 MobiDBLite consensus disorder prediction 264 283 - -
Pte11g00040 449 ProSiteProfiles AP2/ERF domain profile. 411 449 IPR001471 GO:0003700|GO:0006355
Pte11g00040 449 Pfam AP2 domain 300 367 IPR001471 GO:0003700|GO:0006355
Pte11g00040 449 SUPERFAMILY DNA-binding domain 410 444 IPR016177 GO:0003677
Pte11g00040 449 CDD AP2 299 375 IPR001471 GO:0003700|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte11g00040 Pte-Chr11 899267 901490 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00040 1 442 AP2-EREBP Transcription Factor Family AT4G37750 48.211 1.83e-115 348
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte11g00040 AP2 1.9e-09 CL0081
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00040 K09285 - qsa:O6P43_033936 476.478