Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte11g00040 | ATGAAGCGTGCGCATAATCATACTTCCAATAACCATAATATGTCGTTGGGATTCTGTGTTTCTCCTGAAATGAACATCCATGTTGCTTCCGACGCTCGCGAGCTTCACCAGACACAGCCTTTTTCTTCCGCTGCAGCTGCATCAGCAGGGCCAGCATCTTCACCGAGTATTTTACACTTCCTGCCTTCTACGAACTACGGGATATCTTGTGGTCAAAACAGTAGCTTTTATTCCTCAGTGTCTCTAATGCCTCTCAAGTCTGATGGATCTCTTTGTTTACCGGAAGCTCTTAACAAGTCACAGTCACAAGCACTAGTTGCAGCTTCAGCTCCAAAACCGGAAGACTTTTTTGGTGGCGGCACCCATCAATATGAATGCAATAAATTTAGCAGAGATGGAATGCTTTTGAGTTTAGAGAGAGTGATTGACCATCCATCTTCTCAAGAAAGAGGCGAAAAGTCAAGAAACCAAGAACAAGGCCAGTATACTTACTATTCTGGCTTTATTTGCCATAATGGAATGAACAGAATGACAGAATTGGAAAAGCAAAAGCGGGTATCTCATCTAAACTTTCAGGTAGCACAACCAGCTACCACTGAGAATGGAAACCCATCTGGCCCAAAAAGCTGGGCCTTGGGGAGCTATTTGGTGAATCATGTAGATGTAGCAGATCAGAGAATGGTTGGCTTTTCAGATGAAAATGGAGAAATGCAATCGTTAAACTTGTCCGTGAGCCCTGGCTCTCAATCAAGCTGTGTTACCGGTATACAGCATACACATACAAATGTGACGGATTCTATCTCCATGGATAAAAAGAAAAGGAGTCCAGCTGGAAGGTCGGCTACGAAGCAAATTGTTCATAGAAAATCCTTGGATACTTTTGGACAAAGAACGTCCCAGTATAGAGGTGTTACAAGGCATAGATGGACTGGCAGATATGAAGCCCATCTGTGGGATAATAGCTGCAAGAAAGAGGGTCAGACTAGGAAAGGAAGGCAAGGTATATATGCTTCACAACTTCATTCGATTTATTTAGGGGGGTATGATATGGAAGAAAAAGCTGCAAGGGCTTATGATCTGGCTGCACTCAAGTATTGGGGGTCCTCCACTCATATCAATTTTCCATTGGAAAACTACAACAAAGAACTCGAAGAAATGAAGAATATGTCAAGGCAAGAATATGTGGCTCATTTAAGGAGGAAAAGTACTGGATTCTCGAGAGGTGCTTCCATATACAGAGGAGTAACGAGACATCACCAGCATGGACGATGGCAAGCTAGGATTGGCAGGGTAGCTGGGAACAAAGATCTCTATCTGGGAACATTTAGTGAGTTTCTTCGTTCAATCTAA | 1350 | 0.4311 | MKRAHNHTSNNHNMSLGFCVSPEMNIHVASDARELHQTQPFSSAAAASAGPASSPSILHFLPSTNYGISCGQNSSFYSSVSLMPLKSDGSLCLPEALNKSQSQALVAASAPKPEDFFGGGTHQYECNKFSRDGMLLSLERVIDHPSSQERGEKSRNQEQGQYTYYSGFICHNGMNRMTELEKQKRVSHLNFQVAQPATTENGNPSGPKSWALGSYLVNHVDVADQRMVGFSDENGEMQSLNLSVSPGSQSSCVTGIQHTHTNVTDSISMDKKKRSPAGRSATKQIVHRKSLDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGIYASQLHSIYLGGYDMEEKAARAYDLAALKYWGSSTHINFPLENYNKELEEMKNMSRQEYVAHLRRKSTGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSEFLRSI* | 450 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte11g00040 | 449 | ProSiteProfiles | AP2/ERF domain profile. | 300 | 375 | IPR001471 | GO:0003700|GO:0006355 | |
Pte11g00040 | 449 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 112 | 443 | - | - | |
Pte11g00040 | 449 | SUPERFAMILY | DNA-binding domain | 299 | 377 | IPR016177 | GO:0003677 | |
Pte11g00040 | 449 | PRINTS | Ethylene responsive element binding protein signature | 301 | 312 | IPR001471 | GO:0003700|GO:0006355 | |
Pte11g00040 | 449 | PRINTS | Ethylene responsive element binding protein signature | 357 | 377 | IPR001471 | GO:0003700|GO:0006355 | |
Pte11g00040 | 449 | SMART | rav1_2 | 411 | 448 | IPR001471 | GO:0003700|GO:0006355 | |
Pte11g00040 | 449 | SMART | rav1_2 | 300 | 381 | IPR001471 | GO:0003700|GO:0006355 | |
Pte11g00040 | 449 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 299 | 377 | - | - | |
Pte11g00040 | 449 | Gene3D | AP2/ERF domain | 411 | 445 | IPR036955 | GO:0003700|GO:0006355 | |
Pte11g00040 | 449 | Gene3D | AP2/ERF domain | 299 | 377 | IPR036955 | GO:0003700|GO:0006355 | |
Pte11g00040 | 449 | MobiDBLite | consensus disorder prediction | 264 | 283 | - | - | |
Pte11g00040 | 449 | ProSiteProfiles | AP2/ERF domain profile. | 411 | 449 | IPR001471 | GO:0003700|GO:0006355 | |
Pte11g00040 | 449 | Pfam | AP2 domain | 300 | 367 | IPR001471 | GO:0003700|GO:0006355 | |
Pte11g00040 | 449 | SUPERFAMILY | DNA-binding domain | 410 | 444 | IPR016177 | GO:0003677 | |
Pte11g00040 | 449 | CDD | AP2 | 299 | 375 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte11g00040 | Pte-Chr11 | 899267 | 901490 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte11g00040 | 1 | 442 | AP2-EREBP Transcription Factor Family | AT4G37750 | 48.211 | 1.83e-115 | 348 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Pte11g00040 | AP2 | 1.9e-09 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte11g00040 | K09285 | - | qsa:O6P43_033936 | 476.478 |