Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00039 ATGGATGAATCTTTAGGCACACAAGAGGAGGCAGCTGAAGCCTATGACATTGCAGCTATAAAGTTTCGTGGATTAAATGCTGTGACCAACTTTGACATTACAAGATATGACGTGGAAAAAATCATGTCAAGCAGTACTCTCCTAGCTAGTGAATTAGCCAGGCGAAAGAAAGAGATATCTTATGAGAATGATGAGTCAACCAATCTGCACACTCGTACACACGAAAACTTTGTCTCACACACACAGATGAACCATGAAAGCCAGCCAGACCGTAAATGCCTCTTCCATTCCATTCAACAAAGTGAATTGAATGTCGAAACTTGCGGAACTCAGCCATCCTTTGTAACTCCAGATAATACGGGTCAACAAGAAGTAGAGGGCTCCAAAGAGGTAGGAACTCATTTTTCCAATGGTTCTTCGCTGTCGTTGGTGAAGAGCTTGGATCAGAACCCAAGAGAAGGTAGCTCATATAAACCAAGTCTGCCAATGCTTTATGGAATGCCTCAACCAAAATCCAAGTTATACAATAATGCGATGGGTAATTTAAATTCCTGGCCTACACTTCCTTTGCCGCACGTGCCAGTGTTTACTGCCTGGGCAGACACCTAA 609 0.4302 MDESLGTQEEAAEAYDIAAIKFRGLNAVTNFDITRYDVEKIMSSSTLLASELARRKKEISYENDESTNLHTRTHENFVSHTQMNHESQPDRKCLFHSIQQSELNVETCGTQPSFVTPDNTGQQEVEGSKEVGTHFSNGSSLSLVKSLDQNPREGSSYKPSLPMLYGMPQPKSKLYNNAMGNLNSWPTLPLPHVPVFTAWADT* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00039 202 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 122 - -
Pte11g00039 202 Gene3D AP2/ERF domain 4 34 IPR036955 GO:0003700|GO:0006355
Pte11g00039 202 ProSiteProfiles AP2/ERF domain profile. 1 32 IPR001471 GO:0003700|GO:0006355
Pte11g00039 202 SMART rav1_2 2 38 IPR001471 GO:0003700|GO:0006355
Pte11g00039 202 SUPERFAMILY DNA-binding domain 7 33 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00039 Pte-Chr11 898451 899059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00039 4 55 AP2-EREBP Transcription Factor Family AT4G37750 82.692 2.37e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00039 K09285 - tcc:18611333 170.629