Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00034 ATGGGTCTGGATGATCCTTGTAAACTGGCTTTAGGGTTAGGCTTAGCTACGAGTACTACAGAAGGACTCTCTTCGTCAGCAAAAGCCTTTGATCACCATCCTAGCCGGCCAATCAAGTGTAGCTGGAGTTTCTCAGCAACCGGCACCCATTTGGAGACATTTCTTTCATTGGGTCTCTCCGGTGAGAGTCATCCCGTCATTTCCAAGAAGATACTCGATGCGAGCGTGAATAAAGGTTGCGAGGAAGTCTTTGAATTGAGTCGCCAAGCTTCATCTCACAGCGCAGTTTCATCCTTCTCCAGTGGGAGGGTCAAGAGAGAAAGAGACCTTAGCAGCGAAGAAGTAGAGGCAGAGAGGGTTTCTTCAAGGGTGAACGATGAGGATGAAGACGGTAACAATGCAAGGAAGAAGCTCAGACTTACCAAAGAACAATCCGCCGTCTTAGAGGAAAGCTTCAAAAAGCATAGCACTCTCAACCCTAAGCAAAAACAAGTTTTAGCCAGAGAATTGAACCTTCGGCCTCGACAAGTGGAAGTTTGGTTCCAGAATAGGAGAGCCAGGACAAAGCTGAAACAAACGGAGGTGGACTGCGAGTTCTTAAAAAAATGCTGCGAAACATTAACAGATGAAAATAGGAGGCTTCAGAAGGAGCTTCAAGAATTGAAGGCACTGAAACTAGCACAGCCCTTGTATATGCCTATGCCGGCTGCGACTCTTACTATGTGTCCGTCGTGTGAGAGGACGGGTGGCGTCAGCGATGGTGCATCCAACAACGCCTCATTCTCCATACCCCAGAAGCCTCACTTCTTTAATCCCTTCGCCAATCCTTCTGCTGCTTGTTAG 843 0.4781 MGLDDPCKLALGLGLATSTTEGLSSSAKAFDHHPSRPIKCSWSFSATGTHLETFLSLGLSGESHPVISKKILDASVNKGCEEVFELSRQASSHSAVSSFSSGRVKRERDLSSEEVEAERVSSRVNDEDEDGNNARKKLRLTKEQSAVLEESFKKHSTLNPKQKQVLARELNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELKALKLAQPLYMPMPAATLTMCPSCERTGGVSDGASNNASFSIPQKPHFFNPFANPSAAC* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00034 280 SUPERFAMILY Homeodomain-like 125 192 IPR009057 -
Pte11g00034 280 ProSiteProfiles 'Homeobox' domain profile. 131 191 IPR001356 GO:0003677
Pte11g00034 280 MobiDBLite consensus disorder prediction 97 138 - -
Pte11g00034 280 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 29 260 - -
Pte11g00034 280 SMART halz 191 234 IPR003106 GO:0006355|GO:0043565
Pte11g00034 280 MobiDBLite consensus disorder prediction 102 138 - -
Pte11g00034 280 SMART HOX_1 133 195 IPR001356 GO:0003677
Pte11g00034 280 FunFam Homeobox-leucine zipper protein 18 120 196 - -
Pte11g00034 280 ProSitePatterns 'Homeobox' domain signature. 166 189 IPR017970 GO:0000981|GO:0006355
Pte11g00034 280 Gene3D - 128 196 - -
Pte11g00034 280 Pfam Homeobox associated leucine zipper 191 225 IPR003106 GO:0006355|GO:0043565
Pte11g00034 280 Pfam Homeodomain 135 189 IPR001356 GO:0003677
Pte11g00034 280 Coils Coil 197 227 - -
Pte11g00034 280 CDD homeodomain 135 192 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00034 Pte-Chr11 861848 863350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00034 1 281 Homeobox Transcription Factor Family AT4G37790 58.194 1.72e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte11g00034 Homeodomain 1.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00034 K09338 - jre:109019457 342.813