Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00029 ATGATGGATATCTCAATCCCTGTCCCATGCATCCCCCATCAAACAGAAATGATAGATTCCATGTTCACGGATACTTTTGAAACGCATTCAAGTGATGATTTCTCCTTTGAAGATATATTGACAACACTTGACAGTCCTGATGACAACAGTCAGAATTCCATCTCCTCAGACATCAACCGCTGTGGTTCTGATCCATTGTTTACTCCGACCAACTGTGAGACTGCAATTTTCACTCACTTGTTCTGGGTAGAAACGGCCATTGAAAATCAGGGCATATCAAGTATTCTTCATCGTACTGCTTCCACGAGTACTCCTACTTTTGACCCTTCCCGATCCCCTGAAATTTCTGGCATGAGATTAAATGATGTCACCACGGAAGCAGGAGTTTCACCCACTGTTCTGGAGTCTCCAAATTCAGCATATGGGAGTTCAAATCATACTAATGAGACTACAAAGCGGTTCCCTAGAGCACGGGACAACATAGCAGCAGAAAGAAAGCGACGTCAGAAGCTCAGCCAGCTTTTTGTAGCTCTGTCAGCAATGATTCCCGGGTTGAAGAAGGTTGATAAATCTACGGTTCTAGAAGAAACTATAAGGTACATAAAACACCTTCAAGCAGAGGAAAAGAAATTGGAGGGTGATTCTGAAATGCGCGGAGGATATTCAAAAATTATTGTGAAGAAATCAGAATTGTTAGTAGAGGAAAACGGAAATGGGTCGGCAGAAGAGACTTCAGAGAATGCGTGGTCTGGAGAGCTTCCAGAAATTGAAGCAAGGGTATCTGAAAAGAACATTCTTTTTAGAATCCATTGCATGAAGCATGAAGGAGCGGTGGAGAATGCTCTTTGTGAAATAAAGAAATATAAGTTGAGTGTGATGAATACGAGTGCTCACCCTTACGGTGATTTTGCACTTGAGATGACAATCATTGCCAAGGTACGTTGGAAGACTCTTCAGTCTCCAGGAAAAAAAAAATATATTGTTTGTTTTGAAATTAATTGTGATTGTTGTGGTTGCAGATGGAAGATGGGTTTTGCACTTCACTGGAGCAAGTTGTGA 1059 0.4155 MMDISIPVPCIPHQTEMIDSMFTDTFETHSSDDFSFEDILTTLDSPDDNSQNSISSDINRCGSDPLFTPTNCETAIFTHLFWVETAIENQGISSILHRTASTSTPTFDPSRSPEISGMRLNDVTTEAGVSPTVLESPNSAYGSSNHTNETTKRFPRARDNIAAERKRRQKLSQLFVALSAMIPGLKKVDKSTVLEETIRYIKHLQAEEKKLEGDSEMRGGYSKIIVKKSELLVEENGNGSAEETSENAWSGELPEIEARVSEKNILFRIHCMKHEGAVENALCEIKKYKLSVMNTSAHPYGDFALEMTIIAKVRWKTLQSPGKKKYIVCFEINCDCCGCRWKMGFALHWSKL* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00029 352 PANTHER BHLH TRANSCRIPTION FACTOR 33 313 - -
Pte11g00029 352 Gene3D - 152 222 IPR036638 GO:0046983
Pte11g00029 352 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 155 204 IPR011598 GO:0046983
Pte11g00029 352 Pfam Helix-loop-helix DNA-binding domain 161 205 IPR011598 GO:0046983
Pte11g00029 352 SMART finulus 161 210 IPR011598 GO:0046983
Pte11g00029 352 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 160 216 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00029 Pte-Chr11 818841 820588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00029 157 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 41.772 7.02e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte11g00029 HLH 4.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00029 - - qsa:O6P43_024497 178.718