Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00014 ATGGGAAATCAGGTCTCTTTCTTTTTGTCACTGTTATTGCTCTTCATTCTGTCACTTAATACACATAATATAGCAACAAGCTCTCACTACCCCTACCCAAATCACTCAACCCGGCAACACCCTACCCATAGGTGGGTCGGTCCCTCTGGACATCGTGTAATCAAAGCCGACGTCAACGGTGGGGGAGAGTTCCGATCCGTCCAAGAAGCAGTGGATACCGTCCCAGAGAATAATACAATGAATATCCTCATTCAAATTAGCGCCGGATACTACATAGAGAAGGTGGTCATACCAGTGACAAAGCCTTACATTACTTTTGAAGGGGCTGGAAGAGATGTCACTGTGATCGAATGGCATGACCGGGCTGGTGACCGCGGTCCCAATGGACAGCAACTGCGTACTTACAAAACCGCTTCTGTCACTGTTTTTGCTAATCATTTCTCTGCTAGGAACATCAGCTTCAAGAACACAGCGCCGGCACCGTTGCCGGGTATACAAGGATGGCAAGCAGCAGCATTTCGAATCTCTGGGGACAAAGCCTACTTCTCAGGCTGTGGATTTTACGGCGCACAAGACACCCTTTGCGATGATGCCGGTCGTCACTATTTTAAGGAGTGTTACATTGAGGGTTCCATAGATTTCATCTTCGGGAATGGCAGGTCGCTCTACAAAGACTGCGAGATACACTCCATCGCCACGCGATTCGGCTCTATCGCTGCACAAGGTAGAAGATCACCTGATGAGAAAACAGGATTTTCTTTCGTGCGCTGCAGAGTGACGGGTACAGGCCCAATATACGTAGGCCGTGCAATGGGCCAGTACTCCAGGATTGTCTATGCCTATACTTACTTTGATGATGTCGTCGCAGAGGGTGGCTGGGACGACTGGAATCATACGGACAACAAGAACAAAACTGCGTATTTTGGAGTGTACAAGTGCTGGGGCCCAGGATCGGGTGCCTTGCACGGAGTGCAATGGGCCAGAGAGCTAGATTACAAGTCGGCCCATCCATTTCTTGCCAAGAGTTTCGTAAATGGCAGACACTGGATCGCACCTTCCGATACCTAA 1068 0.4934 MGNQVSFFLSLLLLFILSLNTHNIATSSHYPYPNHSTRQHPTHRWVGPSGHRVIKADVNGGGEFRSVQEAVDTVPENNTMNILIQISAGYYIEKVVIPVTKPYITFEGAGRDVTVIEWHDRAGDRGPNGQQLRTYKTASVTVFANHFSARNISFKNTAPAPLPGIQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSLYKDCEIHSIATRFGSIAAQGRRSPDEKTGFSFVRCRVTGTGPIYVGRAMGQYSRIVYAYTYFDDVVAEGGWDDWNHTDNKNKTAYFGVYKCWGPGSGALHGVQWARELDYKSAHPFLAKSFVNGRHWIAPSDT* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00014 355 Gene3D - 51 354 IPR012334 -
Pte11g00014 355 SUPERFAMILY Pectin lyase-like 53 353 IPR011050 -
Pte11g00014 355 Pfam Pectinesterase 59 346 IPR000070 GO:0030599|GO:0042545
Pte11g00014 355 ProSitePatterns Pectinesterase signature 2. 208 217 IPR033131 -
Pte11g00014 355 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 45 351 - -
Pte11g00014 355 FunFam Pectinesterase 49 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00014 Pte-Chr11 309137 310783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00014 1 356 Carbohydrate Esterase AT5G47500 70.000 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00014 - - rcu:8265548 590.882