Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00011 ATGCCTAATTACATACAAATACAATCCAAACCAGTAGCGTTTTTGGCCCATCCCATTGACACGATCACAGGGCCCGGAATTGTATTTGGCGCTGTCTACAAGAATGAGAATTCTAGGGTCTATCTCCGTTCTCCCCACGCGGACTCTCTTTCAGTCAGAGGCACCAGTGCAGCAGACATGACTAAGAGAACTAAGAAGGCCGGCATTGTTGGGAAATATGGTACCAGGTATGGTGCTAGTTTGCGTAAGCAGATCAAGAAGATGGAGGTTAGTCAGCATAGCAAATACTTCTGTGAATTTTGTGGGAAGTATGCAGTGAAGAGGAAGGCTGTAGGTATTTGGGGCTGCAAGGACTGTGGCAAAGTGAAGGCTGGTGGTGCATATACTCTGAATACTGCAAGTGCTGTGACTGTGAGAAGCACCATTAGGAGGCTGAGAGAGCAAACTGAGAGCTAA 456 0.4693 MPNYIQIQSKPVAFLAHPIDTITGPGIVFGAVYKNENSRVYLRSPHADSLSVRGTSAADMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00011 151 Pfam Ribosomal L37ae protein family 63 147 IPR002674 GO:0003735|GO:0005840|GO:0006412
Pte11g00011 151 Gene3D - 60 151 IPR011331 GO:0003735|GO:0005840|GO:0006412
Pte11g00011 151 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 63 131 IPR002674 GO:0003735|GO:0005840|GO:0006412
Pte11g00011 151 FunFam 60S ribosomal protein L37a 61 151 - -
Pte11g00011 151 NCBIfam ribosomal protein eL43 60 150 IPR002674 GO:0003735|GO:0005840|GO:0006412
Pte11g00011 151 Coils Coil 142 151 - -
Pte11g00011 151 SUPERFAMILY Zn-binding ribosomal proteins 69 141 IPR011332 GO:0006412
Pte11g00011 151 PANTHER ZGC:171772 54 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00011 Pte-Chr11 278268 280302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00011 60 152 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 94.624 1.52e-60 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00011 K02921 - lsv:111898551 191.045