Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01790 ATGTTCATCCTTTATCTCTTCACGACTACCATAGCTGATGATGTGACCGTGATGAACGAGCTTCAGAAAGCCATATCCCCACCTGGATGGTCAGGGAAAATTCAATTTTGCCAATGGGATGGTGTCAAGTGTGACTCCTCAGGTCGAGTCACCTCCATAAACCTCGCTTCCAAGTCTCTCTCTGGTACATTGCCTTCTGATCTTAGTTCTCTCTCTGCTCTAACCAGTCTTTCCCTTCAAAAGAATTCCCTTTCCGGGCCATTGCCTTCTTTGGCCAACCTCTCGGAACTGCAAAATGTCAACCTGGATTTCAACAACTTCTCTAGTATACCGCCTGGTTGTTTCAAAGGCCTCACCAGCTTGCAGACTTTGAGCTTGGGTAACAATTTGAATCTTGAGCAATGGACTATGCCAACTGAGTTGAAAGAGCTTACCGGCCTTGTCAACCTTGATATGGGCAGTGTTAATCTTGTGGGTTCTATACCTGATGTGTTTGATTCCTTTCCAAGTCTGCAGGAAGTGAGGCTTTCTTACAATAACCTTACCGGGTCTTTGCCTAAGTCTTTTGGGGGATCTGGGATTCAGAGCTTGTGGATCAACAACCAGGTCTCAGGCTTGTCTGGTAATATTGACGTTTTGGGTTCCATGACTCGGTTGTCTCAGGTTTGGATTCAGAAGAACCTGTTTACTGGTCCTATCCCTGACCTTTCAGAATGCAAAAACTTGGTGGATCTTCAGCTCCGGGATAACCACTTGACAGGTGCTGTTCCACCTTCATTGATGAAACTCTCAACCTTGCAGAATGTTTCTTTGGGTAATAATATGCTCCAGGGTCCATTGCCAGAATTCGGTTCTGGGGTGAAGGTCGCTCTTAATGGGGCTAACAGGTTTTGCAAGACAAGTCCAGGGCCTTGTGATTCGCAGGTGACAATTTTGCTTGATATTGCATCAGCATTTGGTTACCCTTATAAGTTGGCTGATTCGTGGAATGGGAATGATCCTTGTGCTCAATGGAGTTCAGTTGTATGTGATCCCCAGAACAATATCATTACACTCAACTTCGCAAAGCAGGGTCTCACTGGAACAATCTCTCCTGCGATTGCAAATTTAACGGCTTTAAGGAACATATACCTGAATGATAACTATTTGACAGGATCTATACCAGACAGCTTAACTACTTTGTCTAAGCTTCAGATCCTTGATGTTTCTAACAATAATCTTACAGGGGATATACCTAAATTTAATGGAGTGAAGTTTGTTTCTTCTGGTAACGAGTTACTCGGAAAAACAGACAGTGGGAAAGGTGGAGGGACTCCCTCTTCCGGTTCTTCCGGTTCTTCCGGTTCTTCTGGCACTGGCAGTACTTCACTCTCACCTGTCTTGATTGCGTGTATAGTTGCTATCGTTGTGTTCATTATGCTTGTCGTGTTGATTGGCATCTACAAATTTGTTCTGCAAAAACGTATAAAATTAGGAAGGGTGACCAACCCTGAAGATGGAAAGGAAAATAAAACTGAGAAAACGATGGACATACATGGGTTCAATGGAGTTCCAAGTGAATTACAAAGCCAAAGCAGTAGTGATCCTAGTGATGTGAATTCTTTTGATGGTGGAGCTGGTGCTATTTCAATGGAACTTCTTCGGCAAGTAACCAACAATTTTAGTGAGCATAATATCTTAGGTAGGGGAGGATTTGGAGTTGTTTACGAAGGAGAACTGCATGATGGAACCAAAATCGCTGTGAAGAGGATGGAATCTGTTGAAGTGGGAACGAAAGGGTTGAAGGAGTTCCAAGCAGAGCATGCGGTACTCACCAAAGTCAGGCATAGGCATTTGGTTGCTCTTTTGGGACACTGTATCAATGGCAATGAGAGGCTTTTAGTATATGAGTGTATGCCTCAAGGCTCATTGTCACAACATCTGTTTGATTGGAAGGAAAATGGTTACCATCCTCTCACTTGGAAGCAAAGGGTTTCAATAGCTTTGGATGTAGCACGAGGTGTGGAATATCTTCATGGCTTAGCTCAACAAAGCTTCATACACAGAGACTTGAAACCATCCAATATACTATTGGGTGATGACATGAGAGCTAAGGTTGCAGATTTCGGTTTGGTGAAAAATGCTCCTGATGGGAAATACTCTATAGAGACAAAGTTGGCCGGAACGTTTGGATATCTTGCACCTGAATATGCAGCTACTGGAAGAGTGACAACAAAAGTAGATGTTTATGCATTTGGAGTTGTTTTGATGGAACTGATTACCGGTAGAAAGACACTGGACAATACTATGCCGGATGATATGTCTCATTTAGTGACATGGTTCCGCAGAGTGCTTGTCAATAAGGACAATATCCCAAAGGCTGTTGACAAAATCCTTAGCCTTGATGAGGCAACTATGGAGAGCATTTATAAAGTGGCTGAGTTAGCAGGCCATTGTACGGCTAACGAACCATATCAGAGACCAGATATGAGCCATGCAGTTAACGTTTTGGCTCCTCTTGTAGAACAGTGGAAACCCACCTGCCAAGATGACGATGCTGCTTGGGGCATTGATATGCATGTGACTCTGCCTCAAGCTTTGGAAAGATGGCAGGCTAATGAAGGCAATTCTTTCTCACAAACACAATTAAGCATCATCTCAAAACCTCCTGGACTTCCAGATTCCTTTGACTCATTGGATGCTCGGTGA 2688 0.436 MFILYLFTTTIADDVTVMNELQKAISPPGWSGKIQFCQWDGVKCDSSGRVTSINLASKSLSGTLPSDLSSLSALTSLSLQKNSLSGPLPSLANLSELQNVNLDFNNFSSIPPGCFKGLTSLQTLSLGNNLNLEQWTMPTELKELTGLVNLDMGSVNLVGSIPDVFDSFPSLQEVRLSYNNLTGSLPKSFGGSGIQSLWINNQVSGLSGNIDVLGSMTRLSQVWIQKNLFTGPIPDLSECKNLVDLQLRDNHLTGAVPPSLMKLSTLQNVSLGNNMLQGPLPEFGSGVKVALNGANRFCKTSPGPCDSQVTILLDIASAFGYPYKLADSWNGNDPCAQWSSVVCDPQNNIITLNFAKQGLTGTISPAIANLTALRNIYLNDNYLTGSIPDSLTTLSKLQILDVSNNNLTGDIPKFNGVKFVSSGNELLGKTDSGKGGGTPSSGSSGSSGSSGTGSTSLSPVLIACIVAIVVFIMLVVLIGIYKFVLQKRIKLGRVTNPEDGKENKTEKTMDIHGFNGVPSELQSQSSSDPSDVNSFDGGAGAISMELLRQVTNNFSEHNILGRGGFGVVYEGELHDGTKIAVKRMESVEVGTKGLKEFQAEHAVLTKVRHRHLVALLGHCINGNERLLVYECMPQGSLSQHLFDWKENGYHPLTWKQRVSIALDVARGVEYLHGLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSIETKLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRKTLDNTMPDDMSHLVTWFRRVLVNKDNIPKAVDKILSLDEATMESIYKVAELAGHCTANEPYQRPDMSHAVNVLAPLVEQWKPTCQDDDAAWGIDMHVTLPQALERWQANEGNSFSQTQLSIISKPPGLPDSFDSLDAR* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01790 895 SMART LRR_typ_2 168 191 IPR003591 -
Pte10g01790 895 SMART LRR_typ_2 94 117 IPR003591 -
Pte10g01790 895 SMART LRR_typ_2 394 416 IPR003591 -
Pte10g01790 895 ProSiteProfiles Protein kinase domain profile. 554 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01790 895 Gene3D Ribonuclease Inhibitor 306 430 IPR032675 -
Pte10g01790 895 MobiDBLite consensus disorder prediction 517 533 - -
Pte10g01790 895 MobiDBLite consensus disorder prediction 495 509 - -
Pte10g01790 895 FunFam Leucine-rich repeat receptor-like kinase 307 430 - -
Pte10g01790 895 PANTHER OSJNBA0070M12.3 PROTEIN 3 895 - -
Pte10g01790 895 MobiDBLite consensus disorder prediction 495 534 - -
Pte10g01790 895 Gene3D Transferase(Phosphotransferase) domain 1 632 851 - -
Pte10g01790 895 SUPERFAMILY Protein kinase-like (PK-like) 542 851 IPR011009 -
Pte10g01790 895 Gene3D Phosphorylase Kinase; domain 1 517 630 - -
Pte10g01790 895 FunFam Receptor-like kinase TMK4 12 303 - -
Pte10g01790 895 CDD STKc_IRAK 560 833 - -
Pte10g01790 895 Pfam Leucine rich repeat N-terminal domain 306 344 IPR013210 -
Pte10g01790 895 Pfam Leucine rich repeat N-terminal domain 27 45 IPR013210 -
Pte10g01790 895 ProSitePatterns Protein kinases ATP-binding region signature. 560 582 IPR017441 GO:0005524
Pte10g01790 895 Gene3D Ribonuclease Inhibitor 11 303 IPR032675 -
Pte10g01790 895 SUPERFAMILY L domain-like 34 416 - -
Pte10g01790 895 MobiDBLite consensus disorder prediction 434 453 - -
Pte10g01790 895 SMART serkin_6 554 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01790 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 679 691 IPR008271 GO:0004672|GO:0006468
Pte10g01790 895 Pfam Leucine rich repeat 96 154 IPR001611 GO:0005515
Pte10g01790 895 FunFam receptor protein kinase TMK1 632 849 - -
Pte10g01790 895 FunFam receptor protein kinase TMK1 516 631 - -
Pte10g01790 895 MobiDBLite consensus disorder prediction 875 895 - -
Pte10g01790 895 ProSiteProfiles Leucine-rich repeat profile. 396 418 IPR001611 GO:0005515
Pte10g01790 895 Pfam Protein tyrosine and serine/threonine kinase 557 792 IPR001245 GO:0004672|GO:0006468
Pte10g01790 895 MobiDBLite consensus disorder prediction 428 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01790 Pte-Chr10 36305168 36308072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01790 50 835 Receptor kinase-like Gene Family AT5G07280 33.130 3.56e-97 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pte10g01790 PK_Tyr_Ser-Thr 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01790 K00924 - cave:132178560 1186.02