Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01774 ATGTACGTCGGTGAAATATATCACTATTCCTTCCAACAGAGTGTCTTTTACGTTTCGGTATTGCTGACATTAACAAATACTAAACACACATTGCATTTGTCACAGAGTATTCCAAAGAAGTTTACAGATGGACATGGAAAGTGTTTGCCAAATCCAGTGTTTCTTCACCTTCCAAACGGAACAATCTGGACAGTGAAATGGACTTTTTGTGATGATACGATTTGGTTTGAAGAAGGATGGAGTAAATTTGCAGAGTACCTCTCTCTTGGCGTCGGATATTTTCTGATGTTCAAATATGAGGGGAATTCTCGTTTTCATGTCATGGTGTTCGACAAAAGTACAACAGAAGTGGATTACCCTTTACACTCTGGCAATTATGGCGACAATCCCAATGTGGCTCAAGAGTTAAAAGATCAAAATAAAGAGATTTCTGAGAGTGATGATGACTCTGTCGTGTTCCTCGGAGAAGAATCCGCACCATTCCCGAAAGGTAAAGGAGTCACCATTATTGTGTTTTAG 519 0.395 MYVGEIYHYSFQQSVFYVSVLLTLTNTKHTLHLSQSIPKKFTDGHGKCLPNPVFLHLPNGTIWTVKWTFCDDTIWFEEGWSKFAEYLSLGVGYFLMFKYEGNSRFHVMVFDKSTTEVDYPLHSGNYGDNPNVAQELKDQNKEISESDDDSVVFLGEESAPFPKGKGVTIIVF* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01774 172 PANTHER B3 DOMAIN-CONTAINING 25 143 - -
Pte10g01774 172 SMART B3_2 21 113 IPR003340 GO:0003677
Pte10g01774 172 Pfam B3 DNA binding domain 27 112 IPR003340 GO:0003677
Pte10g01774 172 Gene3D - 11 114 IPR015300 -
Pte10g01774 172 SUPERFAMILY DNA-binding pseudobarrel domain 25 113 IPR015300 -
Pte10g01774 172 CDD B3_DNA 36 111 IPR003340 GO:0003677
Pte10g01774 172 ProSiteProfiles B3 DNA-binding domain profile. 20 113 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01774 Pte-Chr10 36164163 36164681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01774 37 152 B3 DNA Binding Superfamily AT1G49475 37.500 1.58e-18 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte10g01774 B3 3.2e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01774 - - cill:122306459 120.938