Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01756 ATGGGTTGTTTCTCATGTTTTGATTCCAAGGAGGAGGAGACTCTCAATCCCAACAAAGAGATCGATGATCAGAAGCAAACCCAACCAACGGTACCTCCTAAAATTTCCAGATTGCCTTCTGGAGTGGACAGGCTTAGAACAAAAAGCATTGGAGGATCCAAAAGGGAGCATCCTGGTCCTAAGGATGGACCTGGTGTACAAATTGCAGCTCAGACTTTTACCTTCCGTGAGCTGGCAGCTGCAACAAAAAATTTTAGACCAGAATCATTCTTGGGAGAAGGGGGTTTTGGCCGGGTGTACAGAGGGCGCCTGGAAAGCACCGGTCAAGTTGTGGTTATGATCCTCCTTGAAATGAGAATGGCAAAGGCTCCAGATCTTCCACCGGATAAAGAACCGTTAGATTGGAACACTAGAATGAAAATAGCGGCTGGTGCAGCAAAAGGTTTGGAGTATTTGCATGACAAAGCTAATCCTCCAGTTATATATAGAGATTTCAAATCTTCTAACATATTACTAGAAGAAGGGTTTCATCCGAAGCTTTCTGACTTCGGTCTGGCAAAGCTTGGTCCCGTAGGAGATAAATCACATGTATCCACCAGGGTGATGGGTACTTATGGATATTGTGCTCCAGAGTATGCTATGACTGGACAACTGACAGTAAAATCTGATGTATATAGTTTTGGGGTAGTCTTTTTGGAGCTGATCACTGGTAGGAAAGCCATCGATAGCACCCAACCTCATGGAGAGCAAAACCTTGTGACATGGGCACGTCCTCTGTTCAACGACCGTAGGAAGTTCTCCAAGTTAGCAGATCCAAGGTTGCAGGGGAAGTATCCCATGCGGGGTCTCTACCAAGCTCTGGCAGTGGCATCCATGTGCATCCAAGAACAAGCTGCCACCCGCCCTCTAATCGGGGATGTGGTCACTGCTCTCTCTTATCTGGCCAACCAGTCTTTTGATCCAAATACAGCAGGGCATGCTTATAGGGGATTCGATGAAAAGCGAAGCAGAGATGAGAGAGTGGGAAGAATATTGAGAAATGAGGAAGGTGGAGGATCTGGACGTAGGTGGGACTTGGATGGATCTGAGAAAGACGACTCCCCACGAGAAACTGCCAGAATATTGAACAGGGATTTGGATAGAGAGCGTGCAGTTGCTGAAGCCAAAATGTGGGGAGAGAACTGGAGAGAAAAAAGGAGACAGAGTGCACAAGGTGGTAGTTTTGATGGCACTGCTGTTTAA 1242 0.467 MGCFSCFDSKEEETLNPNKEIDDQKQTQPTVPPKISRLPSGVDRLRTKSIGGSKREHPGPKDGPGVQIAAQTFTFRELAAATKNFRPESFLGEGGFGRVYRGRLESTGQVVVMILLEMRMAKAPDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWARPLFNDRRKFSKLADPRLQGKYPMRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQSFDPNTAGHAYRGFDEKRSRDERVGRILRNEEGGGSGRRWDLDGSEKDDSPRETARILNRDLDRERAVAEAKMWGENWREKRRQSAQGGSFDGTAV* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01756 413 MobiDBLite consensus disorder prediction 390 413 - -
Pte10g01756 413 SUPERFAMILY Protein kinase-like (PK-like) 69 309 IPR011009 -
Pte10g01756 413 PANTHER OS07G0668900 PROTEIN 25 114 - -
Pte10g01756 413 MobiDBLite consensus disorder prediction 1 66 - -
Pte10g01756 413 Gene3D Phosphorylase Kinase; domain 1 69 129 - -
Pte10g01756 413 Pfam Protein kinase domain 136 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01756 413 MobiDBLite consensus disorder prediction 345 375 - -
Pte10g01756 413 ProSiteProfiles Protein kinase domain profile. 1 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01756 413 FunFam Serine/threonine-protein kinase PBS1 116 328 - -
Pte10g01756 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Pte10g01756 413 Gene3D Transferase(Phosphotransferase) domain 1 130 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01756 Pte-Chr10 35977670 35981747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01756 1 314 Glycoside Hydrolase AT3G07070 49.731 1.05e-116 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pte10g01756 Pkinase 1.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01756 K13430 - tcc:18608901 691.419