Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01754 ATGATGGATGAGATGATGAAGGAGAAAAGAAAGAAGTCTCTGATCAGCAAGACATGGGAACGGTGCAAGTCAATCGGACGTAGTCGCAAGATATCAGATGGGTCATCCAAAATGGTGGTCGGCGCTCTGATGACAAAGAGCAAATCTTGCCCTAATTGCCTAATGACAGACACAAAGCAGCTTCATGGTTCTGACGAAGGCGAAAGCAGACGGAACAACTCAGGCCAGCTCGCTCCTCAAGGTTGCTTCTCAGTGTACGTTGGACCCCAGAGACAGAGGTTTGTGATCAAAACGAGGTATGCGAACCACCCGCTGTTCAAGATGTTGCTTGAAGAAGCTGAGTCCGAATATGGTTACAACAGTCAAGGACCGCTTGTCCTCCCATGCAATGTGGACATCTTTTACAGGGTCTTGATGGAAATGGAAATGGATGACGATGATGGCAGTGGTCCAGATCATGTTCGGATTCGCCATTTAGTAGGATGTGCCTTTGCGAAGCGTCATATCAATATGTCATATCACCTCCTCAGTCCTCATCGTATGGTTGCCATTGCGAATCAGTTCTGA 567 0.4744 MMDEMMKEKRKKSLISKTWERCKSIGRSRKISDGSSKMVVGALMTKSKSCPNCLMTDTKQLHGSDEGESRRNNSGQLAPQGCFSVYVGPQRQRFVIKTRYANHPLFKMLLEEAESEYGYNSQGPLVLPCNVDIFYRVLMEMEMDDDDGSGPDHVRIRHLVGCAFAKRHINMSYHLLSPHRMVAIANQF* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01754 188 MobiDBLite consensus disorder prediction 57 76 - -
Pte10g01754 188 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 60 138 IPR003676 GO:0009733
Pte10g01754 188 Pfam Auxin responsive protein 65 138 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01754 Pte-Chr10 35963583 35965138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01754 64 150 Calmodulin-binding Proteins AT5G20810 43.478 9.05e-19 78.2