Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01750 ATGACAGAGAACAAGGCTGCTGAAATCAGGGATTTCCAAATTATGATATCCAACAAACAAGATGATAAAAAACAGTTGGTGCTCAAGAGAACCTCCAACAAGGACCGCCATAAAAAGGTGGATGGCAGAGGCAGAAGAATAAGGATGCCAGCTTTGTGTGCAGCCAGGGTTTTCCAACTCACCAGAGAGTTGGGCCATAAGACGGATGGAGAAACCATCCAGTGGCTCCTGCAGCAGGCCGAGCCAGCTATCTTTGCTGCCACCGGTTCAGGAACCATACCATCCTTGGCCACGGCAGAAGCCGGGCTCTCTGTTTCGGAGCAGGGTAACTTTGTTTCGTTAGGTTTGCATACGAAGATCCAAGAGCTGGGACCAACTTCTGGCAGGACGAACTGGACAAAGATGAATGCAAATCTTGGGAGATCGGATTCACATGTACCGAGTGGGATTTGGCCCACAGTCAGTGGGGTTGGGTCTGGAATGGTTTGCAATTCTGGCTATTTGGCTTCCAACTATGGTAGCGACACCAAACATGTCCTTACTCAATTTGGGTTCCATGGATTTGAGTTCCCACATATTAACGTAGGTCCAAGGAGTTTCTCCACAAACTTGGGTGCAAGTGCCACTAGGAATGTCCAGCAAGTTCCAGGTTTGGAGCTTGGACTTATGCAGGATGGTCATGTCATGCTGCTAAACTCCGAAACGATGTCCCATATGTACCAACAGCAATTGCAGCAGAGCAGGAGTGATACAGGTGGTGCGCCTTCGATGAGCTCGCAGGAACTTCAATCCAGTGATGAAAAGGACAATTCTCAATGTCAAGATCGGAACAGTAGATTTGAAAGTCACTACTGA 855 0.4819 MTENKAAEIRDFQIMISNKQDDKKQLVLKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPAIFAATGSGTIPSLATAEAGLSVSEQGNFVSLGLHTKIQELGPTSGRTNWTKMNANLGRSDSHVPSGIWPTVSGVGSGMVCNSGYLASNYGSDTKHVLTQFGFHGFEFPHINVGPRSFSTNLGASATRNVQQVPGLELGLMQDGHVMLLNSETMSHMYQQQLQQSRSDTGGAPSMSSQELQSSDEKDNSQCQDRNSRFESHY* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01750 284 MobiDBLite consensus disorder prediction 268 284 - -
Pte10g01750 284 Pfam TCP family transcription factor 31 121 IPR017887 -
Pte10g01750 284 MobiDBLite consensus disorder prediction 239 284 - -
Pte10g01750 284 ProSiteProfiles TCP domain profile. 33 87 IPR017887 -
Pte10g01750 284 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 245 IPR005333 GO:0003700
Pte10g01750 284 MobiDBLite consensus disorder prediction 239 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01750 Pte-Chr10 35945980 35946834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01750 8 240 TCP Transcription Factor Family AT3G27010 51.230 9.61e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte10g01750 TCP 4.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01750 - - qsa:O6P43_023817 332.413