Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01747 ATGAAGCAGCGGTTTTTATTGAGTAGTCCTGATAGTCTACCTAATCATTCACAAATTGATCACCACCACTCAATGGCAACTGTACCTTATTCTGATCCATACTTTGGGGCTTCATTTACCGGATACGGACCACATGCTATTATTCAATCCCAGATGGCCCCCCAAATGCTGGGAATAACACCTGGAAGATTGGCATTGCCACTTGATATAGCTGAAGATGGGCCTATTTATGTCAATGCAAAACAATACCATGGAATCCTTAGAAGAAGACAATCTAGAGCAAAGCTCGAGGCTCAGAATAAGCTTGTCAAAGCTCGCAAGCCCTATCTACATGAATCTCGCCACCAGCATGCTCTGAATAGAGTGAGAGGTTCTGGTGGACGCTTTCTCAGCACCAAAAAGCTCCAACAGTCTATCTCGAAGCCTGTGATAACTGAAAACGATTCTGATTCTAACTTGAGCACTTTATATGGGAAGAATGACGCATTAGTTGAAGGCTTTCACTTGAGGAACGGTGAATATGCATCTTCCGTCAAAACCTGCTCTGACAGCACAAGTGAGTCGAGTAGAAATATCAGTTTCAGGCAGTCTGAACGCAGATTGCTGGTGAACTACCGTGACATGGGGGGAGCGCTACCATGCAGTGGGGGGCTTCCCTTCACTGGAACCCAGCACTGTGCATCTGTAGTCCGGTGA 696 0.4583 MKQRFLLSSPDSLPNHSQIDHHHSMATVPYSDPYFGASFTGYGPHAIIQSQMAPQMLGITPGRLALPLDIAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKLVKARKPYLHESRHQHALNRVRGSGGRFLSTKKLQQSISKPVITENDSDSNLSTLYGKNDALVEGFHLRNGEYASSVKTCSDSTSESSRNISFRQSERRLLVNYRDMGGALPCSGGLPFTGTQHCASVVR* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01747 231 Gene3D - 72 134 - -
Pte10g01747 231 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 10 195 IPR001289 GO:0003700|GO:0006355
Pte10g01747 231 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 75 129 IPR001289 GO:0003700|GO:0006355
Pte10g01747 231 ProSiteProfiles NF-YA/HAP2 family profile. 72 132 IPR001289 GO:0003700|GO:0006355
Pte10g01747 231 ProSitePatterns NF-YA/HAP2 subunit signature. 77 97 IPR018362 GO:0003677|GO:0016602
Pte10g01747 231 PRINTS CCAAT-binding transcription factor subunit B signature 106 129 IPR001289 GO:0003700|GO:0006355
Pte10g01747 231 PRINTS CCAAT-binding transcription factor subunit B signature 75 97 IPR001289 GO:0003700|GO:0006355
Pte10g01747 231 SMART cbf3 71 132 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01747 Pte-Chr10 35926359 35929798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01747 30 138 CCAAT-HAP2 Transcription Factor Family AT1G17590 62.727 4.56e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Pte10g01747 CBFB_NFYA 7.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01747 K08064 - qsa:O6P43_002694 265.774