Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01743 ATGGCTCGCCCAGTGAATATTATTGTAGGTTCGCATGTTTGGGTTGAAGATTCAGCTCAAGCATGGGTCGATGGAGAAGTTTTTAAAATCAGCAGTGAAGAAGTCCATGTCCATACAACCAATGGGAAAACAGTTGTTGCAAATATATCAAATGTTTTTCCCAAAGATACTGAAGCTCCCCCTGGAGGTGTTGATGACATGACTAAGCTGTCCTATTTGCACGAGCCAGGAGTTCTGAACAACTTGGCAGCCAGATATGAGCTCAACGAAATCTATACATATACGGGAAATATCCTGATTGCAGTAAACCCATTTCAAAGATTACCACATCTATATGACACTCATATGATGGAACAATACAAGGGAGCTGCATTTGGTGAGTTGAGTCCTCATGTATTTGCAATTGCAGATGTTGCATACAGGGCAATGATTAATGAAGGAAAGAGCAACTCAATCTTGGTTAGTGGTGAAAGTGGTGCTGGTAAAACTGAGACAACAAAGATGCTCATGAGATATCTTGCGTACCTTGGTGGTCGGTCTGGTGTAGAAGGGCGAACAGTTGAACAACAAGTTCTAGAGTCAAATCCAGTTCTTGAAGCTTTTGGAAATGCAAAAACAGTTAGAAATAATAATTCAAGTCGTTTTGGTAAATTTGTGGAGATCCAATTTGACAACAGTGGGAGGATATCCGGGGCAGCTGTGAGAACTTACTTACTTGAGAGGTCTCGTGTTTGTCAAGTTTCTAACCCTGAGAGAAATTATCATTGCTTTTATCTTCTCTGTGCTGCACCAGCTGAGGAAAGAGACAAGTATAAATTGGGAAGCCCTAGCTCATTCCATTACTTAAATCAATCAAATTGTTATCAACTTGATGGTGTGGATGATGCCCATGAATATCTTGCAACCAGAAGGGCCATGGATGTTGTTGGAATCAGTGATGAAGAACAGGATGCAATATTTAGAGTTGTTGCCGCAATTCTGCATCTGGGAAATATTGAGTTTGCAAAGGGAGAAGAGGTCGACTCTTCAGTCATTAAGGATGAAAAGTCTAGGTTCCATCTGAACACAACAGCAGAACTGCTTAAGTGTGATGCTAAAAGTTTGGAAGACGCATTGATCAAACGTGTGATGGTAACACCTGAAGAAATTATTACAAGAACTCTGGATCCTATTGCAGCTGTTGGTAGCAGAGATGCGTTAGCTAAAACTATTTATTCGCGATTATTTGACTGGCTAGTTGAAAAGATCAACTTTTCAATCGGGCAAGATCCAAGCTCAAAATCTATTATTGGAGTTCTTGACATTTACGGTTTCGAAAGTTTTAAGTTTAATAGTTTTGAGCAGTTCTGCATTAATTTCACTAATGAAAAGCTGCAACAGCATTTCAATCAGCATGTTTTTAAGATGGAACAAGAAGAATATACTAAAGAAGAAATCAACTGGAGCTACATTGAGTTTGTTGATAACCAGGATGTGCTGGATCTTATTGAGAAGAAACCTGGAGGAATAATTGCGCTTCTGGATGAAGCTTGTATGTTCCCTAAATCGACGCATGAAACATTTTCTCAGAAGTTGTACCAGACCTTCCCCAAAAATAAACGCTTCATTAAGCCAAAGCTTTCTCGCACCAATTTCACTATTGCTCATTATGCTGGAGAGGTGACGTACCAGGCTGATCAGTTCCTTGATAAAAATAAGGATTATGTGGTTGCTGAACATCAGGATCTGCTTACAGCCTCGAAATGTCCCTTTGTAGCAGGTCTTTTTCCTCCTTCTCCAGAGGAATCATCAAAATCATCCAAGTTTTCATCCATTGGGTCGCGCTTTAAGTTGCAATTGCAATCACTGATGGAGACGTTGAGCTCAACTGAGCCTCATTATATTAGATGTGTAAAGCCAAATAATATCCTGAAGCCAGCTATATTTGAGAATTTAAGTGTAATCCAACAACTTCGATGCGGTGGTGTTCTTGAGGCAATCAGAATCAGCTGTGCTGGATATCCAACCAGAAGAACCTTCTATGAATTTCTTAACCGCTTTGGTGTTCTTGCCCCTGAAGTTCTGGAAGGGAACAACGACGACAAGGTTGCATGTCAAATAATATTGGATAAAATGGGTTTGGCAGGGTATCAGATTGGTAAAACAAAGGTATTCTTGAGAGCAGGCCAGATGGCTGAGTTGGATGCAAGAAGAGCAGAGGTTCTAGGAAATGCTGCCAGAATTATCCAGAGGCAAATCCGTACTCATATTGCTCGAAAAGAATTCGTTCAATTGCGGAAAGCTGCAATCCAATTTCAATCTTATCTGCAAGGTATGCTAGCTCGTAAGCTTTATGAAGAATTGCGACGTGAAGCAGGAGCCCTGAACATACAAAAGGATTTCAGAAGATACCAGGCCAGGAAGTCCTACTTGACAGCACGATCATCTGCAATTGCAATACAGACAGGGTTGAGGGCTATGAGTGCTCGTAATGAATTTAGACTCAGAAAGCAAACAAAGGCTGCAATATTTATTCAGGCTAATCTGCGTTATCACTTGGCATATTCCTACTATAGAAAGTTACAGAGGGCTGCAGTTGTCACTCAGTGTTGCTGGAGACGAAGGGTTGCTCGTAAAGAACTCAGGAAGCTCAAAATGGCTGCAAGAGAAACAGGTGCCCTCAAGGAAGCAAAGGACAAACTGGAAAAGCGTGTTGAAGAGCTTACATGGCGTTTACAGCTTGAGAAGCGATTAAGAACAGACTTGGAAGAGGAAAAAGCCCAAGAAGTTGCCAAATTGCAGGAAGCTTTGAATTCAATGCAAACCCAATTAGAAGCAGCAAATGCGAGAGCTCTCAAAGAACGTGAGGCGGCTCGCAAAGCTATTGAAGAAGCACCTCCAGTCATTAAGGAAACTCCTGTTTTAGTTGAAGATACTGAAAAGATTAATTCTTTAACAGCTGAGATTGAGAATTTGAAGGAATTACTTCTAGCTGAAAGAAATGCTGCAGAGGAGGAAAGGAGAGCTCGGTTAGATGCTGAGACTAGAAATGCACAGCTTGTTAAAAAACTTGAAGATACTGAGCTGAAAGTGGATCAGCTGCAGGACTCTGTTCAGAGGTTGGAAGAGAAACTTTCTAATATGGAGTCGGAAAACCAAGTACTTCGTCAACAAGCTCTGGCTGTCTCGCCAACTGCTAAAGCATTATCCTCAAGACCAAAGACAGTGATTTTTCAGAGAACACCAGAGAATGGTAATGTTCACAATGGGGAAGCAAAAACGCCAGATATATCTCTTGTGGCATCTGATATACGTGATCCTGTTTCTGAGGGAAGGCCGCAAAAATTTCTCAATGAAAAGCAGCAAGAGAACCAGGAGCTGCTAATCAGGTGCATCTCTCAAGATCTTGGTTTCTCTGGGGGTAAACCTATTGCTGCCTGTATCATTTATAAATGTCTTCTTCATTGGAGGTCATTTGAAGTTGAAAGAACTAGTGTTTTTGACCGTATAATTCAAACAATAGCTTCTGCCGTTGAGGTCCAGGACAACAATGACGTCTTGACATATTGGCTGTGTAATACATCAACGTTGTTGCTGCTGCTCCAACATACTCTGAAAGCAAGTGGAGCAGCCAGTTTGACACCACAACGGAGGAGGACAGCATCAGCTTCTCTGTTTGGAAGGATGTCTCAAGGGTTACGTGGTTCTCCTCAAAGTGCTGGCCTATCATTTCTCAATGGTAGAGGGCTTAGTAGACTGGATGATTTGCGGCAAGTTGAGGCAAAGTATCCAGCATTATTGTTTAAGCAGCAGCTGACTGCATTCCTTGAAAAGATATATGGGATGATAAGAGACAATCTGAAGAAAGAGATCTCCCCGTTACTTGGTTTATGTATCCAGGCTCCGCGAACCTCACGTGCAAGCTTAGTGAAAGGACGTGCTCATGCTAATGCAGTTGCTCAGCAAGCTTTAATTGCTCATTGGCAAAGCATTGTGAAAAGCTTAAACAACTATCTGAATATCATGAGAGCAAACTATGTGCCTCCTTTCTTAGTCCATAAAGTCTTCACTCAAATATTTTCGTTCATCAATGTCCAGTTGTTCAATAGTCTGCTTTTACGGCGTGAATGTTGTTCATTCAGTAATGGGGAGTATGTAAAAGCAGGTTTGGCTGAGTTGGAACAATGGTGTGTTCAAGCAACGGAGGAGTACGCTGGTTCTGCCTGGGATGAACTAAAACATATTAGACAGGCTGTTGGGTTCCTGGTCATACACCAAAAACCCAAAAAGACCTTGAATGAAATAACGAAGGAACTTTGCCCTGTTCTTAGCATACAACAACTATACAGGATCAGTACAATGTACTGGGATGACAAATACGGTACTCACAGCGTGTCTTCAGATGTGATTGCTAGCATGAGAGCTATGATGACTGAGGACTCCAACAACGCTGTCAGCAGCTCATTCCTTTTGGATGATGACTCCAGTATTCCGTTTTCAGTGGATGACATCTCCAAATCAATGCAACAAGTAGATATAGCGGAAATCGATCCTCCACCATTGATTCGAGAAAATTCTGGATTTGGGTTCTTATTAGCACGCTCAGATTGA 4590 0.4159 MARPVNIIVGSHVWVEDSAQAWVDGEVFKISSEEVHVHTTNGKTVVANISNVFPKDTEAPPGGVDDMTKLSYLHEPGVLNNLAARYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDNSGRISGAAVRTYLLERSRVCQVSNPERNYHCFYLLCAAPAEERDKYKLGSPSSFHYLNQSNCYQLDGVDDAHEYLATRRAMDVVGISDEEQDAIFRVVAAILHLGNIEFAKGEEVDSSVIKDEKSRFHLNTTAELLKCDAKSLEDALIKRVMVTPEEIITRTLDPIAAVGSRDALAKTIYSRLFDWLVEKINFSIGQDPSSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLYQTFPKNKRFIKPKLSRTNFTIAHYAGEVTYQADQFLDKNKDYVVAEHQDLLTASKCPFVAGLFPPSPEESSKSSKFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNILKPAIFENLSVIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLEGNNDDKVACQIILDKMGLAGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTHIARKEFVQLRKAAIQFQSYLQGMLARKLYEELRREAGALNIQKDFRRYQARKSYLTARSSAIAIQTGLRAMSARNEFRLRKQTKAAIFIQANLRYHLAYSYYRKLQRAAVVTQCCWRRRVARKELRKLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRTDLEEEKAQEVAKLQEALNSMQTQLEAANARALKEREAARKAIEEAPPVIKETPVLVEDTEKINSLTAEIENLKELLLAERNAAEEERRARLDAETRNAQLVKKLEDTELKVDQLQDSVQRLEEKLSNMESENQVLRQQALAVSPTAKALSSRPKTVIFQRTPENGNVHNGEAKTPDISLVASDIRDPVSEGRPQKFLNEKQQENQELLIRCISQDLGFSGGKPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIASAVEVQDNNDVLTYWLCNTSTLLLLLQHTLKASGAASLTPQRRRTASASLFGRMSQGLRGSPQSAGLSFLNGRGLSRLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRAHANAVAQQALIAHWQSIVKSLNNYLNIMRANYVPPFLVHKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEQWCVQATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSSDVIASMRAMMTEDSNNAVSSSFLLDDDSSIPFSVDDISKSMQQVDIAEIDPPPLIRENSGFGFLLARSD* 1530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01743 1529 FunFam unconventional myosin-Va 834 881 - -
Pte10g01743 1529 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Pte10g01743 1529 FunFam Myosin 2 312 428 - -
Pte10g01743 1529 ProSiteProfiles IQ motif profile. 831 857 IPR000048 GO:0005515
Pte10g01743 1529 SMART DIL_2 1347 1454 IPR002710 -
Pte10g01743 1529 CDD MYSc_Myo11 76 720 IPR036018 -
Pte10g01743 1529 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Pte10g01743 1529 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01743 1529 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01743 1529 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Pte10g01743 1529 Pfam Myosin N-terminal SH3-like domain 9 50 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte10g01743 1529 FunFam Class V myosin 439 578 - -
Pte10g01743 1529 FunFam unconventional myosin-Va 737 785 - -
Pte10g01743 1529 Gene3D - 735 785 - -
Pte10g01743 1529 Gene3D - 833 882 - -
Pte10g01743 1529 Gene3D - 786 832 - -
Pte10g01743 1529 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Pte10g01743 1529 FunFam Myosin heavy chain 252 307 - -
Pte10g01743 1529 Coils Coil 968 1051 - -
Pte10g01743 1529 SMART iq_5 782 804 IPR000048 GO:0005515
Pte10g01743 1529 SMART iq_5 853 875 IPR000048 GO:0005515
Pte10g01743 1529 SMART iq_5 734 756 IPR000048 GO:0005515
Pte10g01743 1529 SMART iq_5 757 779 IPR000048 GO:0005515
Pte10g01743 1529 SMART iq_5 805 827 IPR000048 GO:0005515
Pte10g01743 1529 SMART iq_5 830 852 IPR000048 GO:0005515
Pte10g01743 1529 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Pte10g01743 1529 PANTHER MYOSIN 55 1460 - -
Pte10g01743 1529 ProSiteProfiles IQ motif profile. 737 764 IPR000048 GO:0005515
Pte10g01743 1529 ProSiteProfiles Dilute domain profile. 1161 1472 IPR002710 -
Pte10g01743 1529 Gene3D - 252 310 - -
Pte10g01743 1529 Gene3D - 439 623 - -
Pte10g01743 1529 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte10g01743 1529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 787 883 IPR027417 -
Pte10g01743 1529 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Pte10g01743 1529 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Pte10g01743 1529 Pfam IQ calmodulin-binding motif 786 803 IPR000048 GO:0005515
Pte10g01743 1529 Coils Coil 877 957 - -
Pte10g01743 1529 Gene3D Kinesin motor domain 65 662 IPR036961 -
Pte10g01743 1529 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01743 1529 FunFam Myosin XI D 667 730 - -
Pte10g01743 1529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 785 IPR027417 -
Pte10g01743 1529 CDD MyosinXI_CBD 1112 1495 IPR037975 GO:0007015
Pte10g01743 1529 Pfam DIL domain 1348 1451 IPR002710 -
Pte10g01743 1529 Gene3D - 667 733 - -
Pte10g01743 1529 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01743 1529 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01743 1529 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01743 1529 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01743 1529 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01743 1529 FunFam unconventional myosin-Va 786 833 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01743 Pte-Chr10 35883815 35900328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01743 67 1529 Myosins gene family AT5G20490 82.923 0.0 2513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01743 K10357 - mnt:21409959 2620.11