Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01737 ATGCCAGTAAGAGTTCCATTCCTAAGAATTTCGTCAGCAAAAGGCAGTGGACGTATCATGGCTATGATGAGAGCTACAATGGTTCAAAAGATCGAAAGAATAATACACAGGGACATTGAAAGGCAAAGAAGGCACGAAATGTCTAGCCTCTATACTTCACTTAGAGCTCTTCTCCCTTATGAGTTCATCAAGGGAAAGCGTTCGATATCAGATCATGTGAATGAGACAGTGAACTACGTCAAGCACTTGCAGCAGAAAATCAAAGAACTAAATGGCAAGAGAGATGAACTGAAGAAAGAGTCCAACTTGAGACATGAAGAGAACTTTAACTGCACTTAA 339 0.4041 MPVRVPFLRISSAKGSGRIMAMMRATMVQKIERIIHRDIERQRRHEMSSLYTSLRALLPYEFIKGKRSISDHVNETVNYVKHLQQKIKELNGKRDELKKESNLRHEENFNCT* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01737 112 Coils Coil 80 103 - -
Pte10g01737 112 Pfam Helix-loop-helix DNA-binding domain 33 84 IPR011598 GO:0046983
Pte10g01737 112 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 31 83 IPR011598 GO:0046983
Pte10g01737 112 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 33 101 IPR036638 GO:0046983
Pte10g01737 112 CDD bHLH_AtORG2_like 32 102 - -
Pte10g01737 112 SMART finulus 37 89 IPR011598 GO:0046983
Pte10g01737 112 Gene3D - 24 111 IPR036638 GO:0046983
Pte10g01737 112 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 30 105 - -
Pte10g01737 112 FunFam Transcription factor bHLH126 23 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01737 Pte-Chr10 35822344 35822864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01737 31 97 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 67.164 9.68e-28 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte10g01737 HLH 2.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01737 - - hbr:110638222 112.849