Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01736 ATGTGTGGAGACGCTACAAATTGGGACGAAAACGCTTACAGGGATAGCATACTCAAGGAGAGAGAGGTTCAAACCCGAACTGTTTTCCGTACCGCATGGCCTCCCGGTCACAATGTCAACCCGGAGGTCATCGTCGTTGCCTCCAGTGACGGATCCCTGGCTTCCTATTCTATCTCCACCAACTTCCCATTTGGTGTAAACAATGTCAACTCACAAAAGCTATCAGCTGAATCCAATTGGTTTATTCAAGCTCACGATGGACCTGCATATGATGTCAAATTCTACGGAGATGGTGAAGACGCCTTGTTATTGAGTTGTGGTGATGATGGCCGTATTCAAGGGTGGAGATGGATGGAACTTATAAGCTCTGAGGTTTCTCTATCTCTGCAGGGGAATCATGTGAAGCCTTTACTAAACCTAGTTAATGATCAGCACAGAGGTCCTTGGGGAGCCCTTTCTCCAATTCCTGAGAATAATGCTATTGCTGTTGATGATCAGGGGGGATCAATTTTTTCGGCATCCGGTGATTCTTGCGCATATTGTTGGGATGTGGAAACTGGTAGAGTCAAAGTAACTTTTAAGGGCCATTCAGACTATTTGCATTGCATATCTGCTTGCAAGTCTGCCAATCAGATAATAACAGGTTCAGAGGATGGAACTGCAAGAATTTGGGATTGCAGAAGTGGGAAGTGTGTTCATGTTATTGATCCATCTAAAGATATGAAGTGTAAAGGACGAGATTTACATGTTAGTTCCATTGCCGTAGACACCAATGGGATCTGGTTGGCTTGCTGTATTGGTCGGGATATATCAATTTGGAATCTTCCTGCCTTTGAGTGCGTATCTAGGTTTTCAACTCGTGCTCCAGTACAAGATGCAGTATTTGATTACAATGAAATTTTAGCGGTTGGAGCAGAACCTCTGCTCAACCGATTTGACATGAATGGGAAGATCCTTTCGCAAATACAGTGTGCTCCTTCCTCAGCCTTTTCTGTCTCGCTGCATCCATCTGGGGTTACTGCAGTTGGAGGCTATGGAGGTCTAGTGGATGTTATCTCCCAATTTGGAAGCCACATGTGTACTTTTCGCTGCAGGAGTATTTAA 1104 0.4466 MCGDATNWDENAYRDSILKEREVQTRTVFRTAWPPGHNVNPEVIVVASSDGSLASYSISTNFPFGVNNVNSQKLSAESNWFIQAHDGPAYDVKFYGDGEDALLLSCGDDGRIQGWRWMELISSEVSLSLQGNHVKPLLNLVNDQHRGPWGALSPIPENNAIAVDDQGGSIFSASGDSCAYCWDVETGRVKVTFKGHSDYLHCISACKSANQIITGSEDGTARIWDCRSGKCVHVIDPSKDMKCKGRDLHVSSIAVDTNGIWLACCIGRDISIWNLPAFECVSRFSTRAPVQDAVFDYNEILAVGAEPLLNRFDMNGKILSQIQCAPSSAFSVSLHPSGVTAVGGYGGLVDVISQFGSHMCTFRCRSI* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01736 367 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 193 230 - -
Pte10g01736 367 Pfam WD domain, G-beta repeat 192 225 IPR001680 GO:0005515
Pte10g01736 367 ProSitePatterns Trp-Asp (WD) repeats signature. 212 226 IPR019775 -
Pte10g01736 367 Gene3D - 146 365 IPR015943 GO:0005515
Pte10g01736 367 SUPERFAMILY WD40 repeat-like 25 349 IPR036322 GO:0005515
Pte10g01736 367 Gene3D - 7 145 IPR015943 GO:0005515
Pte10g01736 367 SMART WD40_4 14 57 IPR001680 GO:0005515
Pte10g01736 367 SMART WD40_4 148 183 IPR001680 GO:0005515
Pte10g01736 367 SMART WD40_4 186 225 IPR001680 GO:0005515
Pte10g01736 367 SMART WD40_4 315 353 IPR001680 GO:0005515
Pte10g01736 367 SMART WD40_4 75 116 IPR001680 GO:0005515
Pte10g01736 367 SMART WD40_4 228 274 IPR001680 GO:0005515
Pte10g01736 367 ProSiteProfiles Trp-Asp (WD) repeats profile. 193 234 IPR001680 GO:0005515
Pte10g01736 367 PANTHER THO COMPLEX SUBUNIT 6 HOMOLOG 1 365 IPR042626 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01736 166 230 Eukaryotic Initiation Factors Gene Family AT2G46280 33.846 1.54e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01736 - - cave:132165220 562.762