Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01732 ATGGAACCTCGCGTAGCCAACAGGTTTCGGCTTGGCCGGAAGATCGGCAGCGGCTCATTTGGCGAGATCTATTTAGGTACTAATATTCAGACTAATGAAGAAGTCGCAATTAAGCTTGAAAATGTTAAGACAAAGCATCCCCAGTTGCTCTATGAATCAAAGTTGTACAGAATTCTGCAGGGAGGAACTGGGATTCCTAATGTTAAATGGTTCGGAGTGGAGGGAGATTACAATGTTCTGGTGATCGATTTGCTTGGCCCCAGTCTTGAAGATCTTTTTAACTTTTGTAGTAGAAAGCTGTCACTGAAGTCAGTTCTCATGCTGGCCGATCAAATGATTAATCGTGTGGAGTTTGTTCATTCTAAGTCATTTCTTCATCGAGATATCAAGCCGGATAATTTTCTTATGGGGTTAGGAAGGCGTGCAAACCAGGTTTATATGATTGACTTTGGCCTGGCAAAGAAATATAGAGACAGTTCAACCCATCAGCACATTCCTTACAGAGAAAATAAAAACTTGACTGGAACAGCAAGATATGCAAGCATGAATACCCATCTTGGTATTGAGCAAAGCAGGCGGGATGATCTCGAGTCTCTTGGTTATCTCCTTATGTACTTTCTCAGAGGAAGTCTTCCTTGGCAGGGACTGAAAGCAGGAAATAAGAAACAGAAATATGAGAAAATAAGTGAAAAAAAGGTTTCTACTTCAATTGAGACACTATGTCGGGGTTATCCAACAGAGTTTGCATCCTACTTCCATTACTGCCGATCGTTACGGTTTGATGACAAGCCAGATTATGCATATCTTAAAAGAATATTCCGTGACCTCTTTATCCGTGAAGGGTTCCAGTTTGATTACGTATTTGATTGGACCATACTGAAGTATCAACAATCTCAGCTGGCAGCTCCTGCAGCACGTACCATTGGTCCGGGTGTGGGAACTAGTTCAGGACTGCCCCTTGGTATTCCTAATTCTGACCGACATACAGGTGGAGAGGACAGACAGCCATCTGGCATGGTATCAGGTGATTCCACCAGGCAGAGAATGTCAGGACCAATAATAAATTCTGGAAGGCAGAAAAGTCCTGCCACAAATGCAATTGTTGCTATGTCGTCAAGCTCCAATATGTTGGGTCAATCTAGTGGATCAAGGCGAGTTGCCATTTCTGGTAGCCGTGATGCATTTTTGGCCAGTGAATCAGATTTTCATCGTTCTCATAACAAAAGAAGCTCACCAGCTGGTTCTTCATCTGACCCAAGGCGAGGAGCATCAGCTGGAAGATCTGCTCTTGTAAAGAATTATGATGCTGCATTAAAGGGTATTGAGAGCTTGCAATTGGACAATGATGAGAGGATACAACAGTAA 1365 0.4293 MEPRVANRFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVKWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKSVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYMIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYLLMYFLRGSLPWQGLKAGNKKQKYEKISEKKVSTSIETLCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLAAPAARTIGPGVGTSSGLPLGIPNSDRHTGGEDRQPSGMVSGDSTRQRMSGPIINSGRQKSPATNAIVAMSSSSNMLGQSSGSRRVAISGSRDAFLASESDFHRSHNKRSSPAGSSSDPRRGASAGRSALVKNYDAALKGIESLQLDNDERIQQ* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01732 454 FunFam Putative Casein kinase I 1 85 - -
Pte10g01732 454 CDD STKc_CK1_delta_epsilon 8 282 - -
Pte10g01732 454 PANTHER CASEIN KINASE-RELATED 8 378 - -
Pte10g01732 454 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01732 454 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pte10g01732 454 MobiDBLite consensus disorder prediction 398 428 - -
Pte10g01732 454 FunFam Casein kinase I isoform delta-like 1 308 - -
Pte10g01732 454 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01732 454 Gene3D Transferase(Phosphotransferase) domain 1 1 307 - -
Pte10g01732 454 MobiDBLite consensus disorder prediction 338 363 - -
Pte10g01732 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pte10g01732 454 MobiDBLite consensus disorder prediction 312 363 - -
Pte10g01732 454 SUPERFAMILY Protein kinase-like (PK-like) 6 290 IPR011009 -
Pte10g01732 454 Pfam Protein kinase domain 10 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01732 Pte-Chr10 35792444 35798388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01732 7 219 EF-hand Containing Proteins AT2G17890 26.697 1.49e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pte10g01732 Pkinase 4.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01732 K02218 - zju:107424125 739.954