Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01721 ATGGAGAAGCTGAATTTTGTCAAGAATGGTGTGCTTCGATTACCCCCTGGATTTAGGTTTCACCCTACAGATGAAGAGCTCGTGGTTCAGTACTTGAAACGGAAGGTCCTTTCTTGCCCCTTGCCTGCCTCCATCATCCCTGAGATCGATGTCTGCAAGTCTGATCCTTGGGATTTGCCAGGCGATCTGGAGCAAGAAAGGTACTTCTTCAGCACCAGGGAGGCCAAATATCCCAATGGGAATCGATCCAACAGAGCCACAGGTTCTGGTTACTGGAAGGCAACCGGATTGGACAAACAAATTGTTACCTCAAGGAGCAATCTTGTTGTTGGGATGAAGAAGACTTTGGTTTTCTACAGAGGTAAACCACCCCATGGCTCAAGAACGGATTGGATCATGCACGAATATCGCCTCCTCACCCATGCCACACAAGCACAAACGAAGAATGCAATTCAGAGCCCTCCGGAGCTGCTAAACGATAATTGGATACTCTGCCGCATTTTTTTGAAGAGGAGAAACGCTAGTTGTAAACAGGAGGATGAGAACATCCGATCAAATGTTTGTGTTGACAAGAGCATCCGGAAAGTCAGGGATTCTAGGCCAGTTTTCTACGACTTCTTGTCAAAGAACAGGACAGACCTAAACCTCGTCCCTGCTTCACCGTCTTCAGGAACTAGTGCAATTACAGAAGCCTCTTCCAATGAGTCAGATGATCGTGAAGAAAATAGCAGTTGCAATAGCTTTCCTTTATTCCGAAGAAAGTCATGA 768 0.4635 MEKLNFVKNGVLRLPPGFRFHPTDEELVVQYLKRKVLSCPLPASIIPEIDVCKSDPWDLPGDLEQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIVTSRSNLVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLLTHATQAQTKNAIQSPPELLNDNWILCRIFLKRRNASCKQEDENIRSNVCVDKSIRKVRDSRPVFYDFLSKNRTDLNLVPASPSSGTSAITEASSNESDDREENSSCNSFPLFRRKS* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01721 255 MobiDBLite consensus disorder prediction 217 255 - -
Pte10g01721 255 Pfam No apical meristem (NAM) protein 15 138 IPR003441 GO:0003677|GO:0006355
Pte10g01721 255 SUPERFAMILY NAC domain 10 170 IPR036093 GO:0003677|GO:0006355
Pte10g01721 255 ProSiteProfiles NAC domain profile. 14 170 IPR003441 GO:0003677|GO:0006355
Pte10g01721 255 MobiDBLite consensus disorder prediction 217 232 - -
Pte10g01721 255 Gene3D NAC domain 23 175 IPR036093 GO:0003677|GO:0006355
Pte10g01721 255 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01721 Pte-Chr10 35624908 35627244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01721 1 248 NAC Transcription Factor Family AT5G13180 60.606 1.70e-104 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte10g01721 NAM 4.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01721 - - tcc:18608896 386.726