Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01700 ATGCAGAAGGAACTGCTAACGGGTTTTGAAGGAATGCCGACGGAGTCAAAGCTTTTATTTGATCCAATTATGTTGAGAGTTCTTCATTCTGATCAGACTCAAAGTTTACTGCATAATCATGGGGGTGCAAGTGAAATCAAAACATCATCAGCATCGTCTGAAAAGCACTTTGATTCTGGATTCAATCCTGGCCATCATTCTAGTATGACAGCAGTCTCAGACATCAAAGAGATTATTCCTATGATTGTTTTGAATATGCCTCCTGCATTACCTAAAGCAAAAGAATCAGTACCATCCTCTCCATTTTCATTGTCAATTTCTCCTAGATTCCACAGCTTAAACTTGGGTGTGCAGGAACCAAGTATGCTCGATTCATCAACCATGGGAACCAAGAGCGAAAATCATCGAAGAGTGTCAGCTACTGCAGACCCTTCTCCTACACTTCCATCTGAAAACCAAACTCAATTCCAGGCAAATGTTGATTGGCTCAAGTTCAGCCATAGCCTACAAAGCAATCCCTCTAAATCTCTTACTCGTGACTATTGGTTGAGCACTACAAAGACACCGCCGATGAAATATACTGGAAGCAGGTCAAAAAACCAGCTGCGTAAAACCAGTGTGTCATCCGTATCATCAGGAGGCAAGATTTTCAGAGGAGTCAGACAAAGACATTGGGGAAAGTGGGTTGCAGAGATACGACTGCCAAGAAATAGAACAAGGGTGTGGTTAGGAACATTTGGTACAGCTGAAGAAGCTGCCATTGCATATGATACAGCAGCTTACATGTTAAGAGGAGACTGTGCTCAGTTGAATTTTCCAGATAGGAAACATCAAACTGAGGCCAATTCTTTGTATGGCACCATTGCAGCGCTTCTGCAAGCTAAGTTACAAGCAAGTGGACAAGGAAATTCTTCTCTTATCAGTTCAAAAATCACCAGCTCGCAACAAGAAAAGCAGTTGACTGTCAATGAAGGAATTGAAAGTAAAAGTACAGATCAGAATGCCGTTATGAAACTATGGCAAATTGATTTGGATAACAAAGTTGGGCCTGTGATGGAGAGTAGGAAAGGTCATTCAGAGATTTTATCAGATGGAGATGGAGTTCAGTTAAGTAGAATGCCCTCCTTGGACATGGATATGATCTGGGATGCTATTTTAGTATCTGATTTATGA 1173 0.4135 MQKELLTGFEGMPTESKLLFDPIMLRVLHSDQTQSLLHNHGGASEIKTSSASSEKHFDSGFNPGHHSSMTAVSDIKEIIPMIVLNMPPALPKAKESVPSSPFSLSISPRFHSLNLGVQEPSMLDSSTMGTKSENHRRVSATADPSPTLPSENQTQFQANVDWLKFSHSLQSNPSKSLTRDYWLSTTKTPPMKYTGSRSKNQLRKTSVSSVSSGGKIFRGVRQRHWGKWVAEIRLPRNRTRVWLGTFGTAEEAAIAYDTAAYMLRGDCAQLNFPDRKHQTEANSLYGTIAALLQAKLQASGQGNSSLISSKITSSQQEKQLTVNEGIESKSTDQNAVMKLWQIDLDNKVGPVMESRKGHSEILSDGDGVQLSRMPSLDMDMIWDAILVSDL* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01700 390 ProSiteProfiles AP2/ERF domain profile. 216 273 IPR001471 GO:0003700|GO:0006355
Pte10g01700 390 CDD AP2 215 274 IPR001471 GO:0003700|GO:0006355
Pte10g01700 390 PRINTS Ethylene responsive element binding protein signature 239 255 IPR001471 GO:0003700|GO:0006355
Pte10g01700 390 PRINTS Ethylene responsive element binding protein signature 217 228 IPR001471 GO:0003700|GO:0006355
Pte10g01700 390 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 76 385 - -
Pte10g01700 390 MobiDBLite consensus disorder prediction 42 68 - -
Pte10g01700 390 FunFam Ethylene-responsive transcription factor 2 215 274 - -
Pte10g01700 390 SUPERFAMILY DNA-binding domain 216 274 IPR016177 GO:0003677
Pte10g01700 390 SMART rav1_2 216 279 IPR001471 GO:0003700|GO:0006355
Pte10g01700 390 Gene3D AP2/ERF domain 216 274 IPR036955 GO:0003700|GO:0006355
Pte10g01700 390 MobiDBLite consensus disorder prediction 122 151 - -
Pte10g01700 390 Pfam AP2 domain 217 265 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01700 Pte-Chr10 35415248 35416513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01700 112 385 AP2-EREBP Transcription Factor Family AT4G13620 44.000 2.80e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte10g01700 AP2 3.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01700 - - tcc:18602724 294.278