Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01695 ATGTTGTTTTGCTATGATGCCGAGTCATTGCAGGCACTTATGCCAGCCCCAAGTTTTAACGCATCAATAGACTATTCCCTCGGTCATCAACAACATCAGCAGTATCCTCATAATCATGAACAACAAGAGCAGCAGTTTGTTTCGTCTAAGTTTCGAATTGGATCAGAAACTCTAGGAGATAACAGCAACGTTATGGTGGATTACATGCTAAATAACACACAGCATCATCAGCAACAAACAGCACAGCCATCTTCTGCTTTTTACGGTTCGAGTTCTTTCGACAAATTCAGCTTTGCAGATGTGATGCAGTTTGCAGATTTTGGACCAAAGTTGGCCTTAAACCAAACCAAGAATCCCGAAGAATCTGGAATCGACCCGGTTTACTTCCTCAAGTTTCCAGTCTTGAATGAAAATAATAAGTCTGATTTGGATCATCAGAATCTAATGGCTAATGCAGAAACTGAAGACAAGCTCAAAGTTGCAAGAGTGGATCATGAGAACTTAAAACAAACTATGGAGGAAGAAAGAGCAATACTACTCAGAAATGATGAAGACGTACGTGCTGCCTCAGACACTAATTCAGTGCAGCTGAATTTTCTTGGTGAAGATCTTCAGAAAAACTCTCAACAGGGATCAAAAAGCAAAAAGAAAAGACCAAGAATCATCAAGACCATTGCGGAAGTTGAGAACCAAAGGATGACTCACATTGCAGTTGAAAGAAATCGAAGAAAGCAAATGAATGAACATCTTCGTGTCTTAAGGTCTCTCATGCCTGGCTCTTACGTTCAAAGGGGGGACCAAGCTTCGATAATAGGAGGAGCTATTGAGTTTGTGAGGGAATTAGAGCAGCTTCTGCAGTGTTTGGAGTCACAGAAAAGGAGAAGGCTATTTGGAGAAGGAGCAGCAACCACAAGACAAGCTGGAGATTCTTCTGCTCTTGTAATTCAACAGTCAAATCAGAAGCCACCACTGTTTCCTCCATTGGCTATACCAAATGAGCAAATGAAACTTGCCATGGAGTTTGAGACCGGGCTTCTTGAAGAAACCGCTGAGAACAAGTCGTGCTTGGCTGATGTCGAAGTAAAGCTTTTAGGGTTCGATGCTATGATCAAAATACTTTCAAGGAGAAGGCCTGGACAGCTCATCAAAACCATTGCTGCACTTGAGGACTTGCAGCTTAATATTCTTCATACCAACATCACCACGATTGAACAAACAGTTCTTTACTCATTCAATGTCAAAGTAGCAAGTGATTCAAGGTTCACAGCTGAAGACATAGCAACTTCTGTTCAACAGATATTCAGTTTTATACATGCAAACAATGGCATGTGA 1332 0.4129 MLFCYDAESLQALMPAPSFNASIDYSLGHQQHQQYPHNHEQQEQQFVSSKFRIGSETLGDNSNVMVDYMLNNTQHHQQQTAQPSSAFYGSSSFDKFSFADVMQFADFGPKLALNQTKNPEESGIDPVYFLKFPVLNENNKSDLDHQNLMANAETEDKLKVARVDHENLKQTMEEERAILLRNDEDVRAASDTNSVQLNFLGEDLQKNSQQGSKSKKKRPRIIKTIAEVENQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLFGEGAATTRQAGDSSALVIQQSNQKPPLFPPLAIPNEQMKLAMEFETGLLEETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLQLNILHTNITTIEQTVLYSFNVKVASDSRFTAEDIATSVQQIFSFIHANNGM* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01695 443 Pfam Helix-loop-helix DNA-binding domain 231 282 IPR011598 GO:0046983
Pte10g01695 443 Gene3D - 223 295 IPR036638 GO:0046983
Pte10g01695 443 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 230 281 IPR011598 GO:0046983
Pte10g01695 443 Coils Coil 151 171 - -
Pte10g01695 443 PANTHER TRANSCRIPTION FACTOR FAMA 64 434 IPR044283 GO:0003700|GO:0010052
Pte10g01695 443 FunFam Basic helix-loop-helix transcription factor 221 296 - -
Pte10g01695 443 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 230 296 IPR036638 GO:0046983
Pte10g01695 443 CDD ACT_UUR-ACR-like 369 433 - -
Pte10g01695 443 CDD bHLH_AtFAMA_like 233 303 - -
Pte10g01695 443 SMART finulus 236 287 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01695 Pte-Chr10 35376505 35379172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01695 60 444 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 61.500 8.95e-145 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte10g01695 HLH 9.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01695 K26213 - qsu:112039857 484.567