Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01687 ATGTTCGGTCTTCAACATAGGTATGGAGCCCTGCTGCTCCTGAAGAGGAAGCCGAAATTTCTTGCTGCTTTTACGCCATTCTCAATCAGAACCTCATCACCTCAGCCCCAGAACTCCGCACAGAGATTCTGGTACTGTCAACTCACTCGTCCAGTAAAAGAAGAGTCTTTTGTGCTGTCTTATCTCATAGAGAATTGTGGGTTCTCCCTTGACAGAGCTATCTCAACTGCCAAGCGTGTTCGTTTTGAGAACTCGCGGAGACCAGACGTTTGCTTCACTTTCTTTAGGAGCTATGGTTTCTCTGACCATCAAATCTGCACTATTTTCAGAAGGTTGCCGCCTCTGCTTTTATTTGACCCCCAAAAGATCATTTTACCCAAGTTGGAGTTTTTCGAGTCCAAAGGTTTTTCTAGATCTGACATTGTCTCTATGGTGTCATACGCTCCGTGGTTCTTAGAGAGAAGCTTGGAGAATTTTATCATTCCTTCTTTTGATTTAGTTAAGGATTTGTGTCGTCCTGATGAGAAGAAGGCTATCCAAACTGTGAAAACTTGTCCATATGTTCTGTCCACAACTCAACTCTGGGATAATGTGCAATTTTTGATCGACAATGGAGTTTCAAAGTCGAATGTTGTTCTACTACTCCAGTTATGTCCACGTCTATTGACTTTAAGATCGAATAAATTCAAGGAGGCAGTGGAACAAGTAACGGAGTTAGGTTTTGAAATGTCGAATTTGAAAACAAACTTTGTTCTGGCGTTGGTTTCCAAAATAGGTATGAGCAAGTCGAAGTGGGATAGGAAGGCAGAGCTTTTTAAGAAATGGGGTTGGTCAGCAGAAGTGCTCATTTCTGCGTTTAAGGTCAATCCTAAGTTGATGCGAAACTCTGCTAACAAAATTGATGCAGTTATGGATTACTGGGTACACCAATTGGGTTGGGACGCTTCAATTCTAGCCAAAGGTTCAGCAGTTATAGGTTACAGCTTGGAGAGGAGAATCAAACCAAGGGCTTCTGTTCTGCAGTATCTATTGTCGAAAAGTTTAATTGATAAGAAGGCTGGCTTGATTGTGCCATTTTGTCTTAATGAAAAATTGTTCTTGCAGAGGTATGTGGAATGTTATAGGGAAGAAACTCCTCAATTACTGAAGCTGTATAATGACAATTTGAATATTTCACATTGA 1182 0.4112 MFGLQHRYGALLLLKRKPKFLAAFTPFSIRTSSPQPQNSAQRFWYCQLTRPVKEESFVLSYLIENCGFSLDRAISTAKRVRFENSRRPDVCFTFFRSYGFSDHQICTIFRRLPPLLLFDPQKIILPKLEFFESKGFSRSDIVSMVSYAPWFLERSLENFIIPSFDLVKDLCRPDEKKAIQTVKTCPYVLSTTQLWDNVQFLIDNGVSKSNVVLLLQLCPRLLTLRSNKFKEAVEQVTELGFEMSNLKTNFVLALVSKIGMSKSKWDRKAELFKKWGWSAEVLISAFKVNPKLMRNSANKIDAVMDYWVHQLGWDASILAKGSAVIGYSLERRIKPRASVLQYLLSKSLIDKKAGLIVPFCLNEKLFLQRYVECYREETPQLLKLYNDNLNISH* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01687 393 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Pte10g01687 393 SMART mt_12 179 207 IPR003690 GO:0003690|GO:0006355
Pte10g01687 393 SMART mt_12 142 173 IPR003690 GO:0003690|GO:0006355
Pte10g01687 393 SMART mt_12 212 242 IPR003690 GO:0003690|GO:0006355
Pte10g01687 393 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Pte10g01687 393 SMART mt_12 315 349 IPR003690 GO:0003690|GO:0006355
Pte10g01687 393 Pfam mTERF 197 351 IPR003690 GO:0003690|GO:0006355
Pte10g01687 393 Pfam mTERF 94 306 IPR003690 GO:0003690|GO:0006355
Pte10g01687 393 Gene3D Transcription termination factor 3, mitochondrial 174 384 IPR038538 -
Pte10g01687 393 PANTHER CGI-12 PROTEIN-RELATED 56 376 IPR003690 GO:0003690|GO:0006355
Pte10g01687 393 FunFam Mitochondrial transcription termination factor-like 156 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01687 Pte-Chr10 35326660 35328224 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte10g01687 mTERF 2.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01687 K15031 - gmx:102667698 280.796