Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01677 ATGGAGTGTGAATTACTGTGCAGGGAGATCGTAAAGCCCACTTCTCCAACTCCTTCCCATCTTAGAATTTATTCCCTTTCTTTTTTAGATCATATTATTTTCAGTAATTACTCCTCCATAATCTACTTCTATGATCACCAGATTTGCTATACGCCGAGCAAAATTGATGAAAAGTTCAATGAGCTCAGGAAGTCTCTATCAGAAACACTAGCTTTATACTATCCATTCGCTGGAAGACTCAGAGATCGAGTTTCAGTCGACTGCAATGATGAGGGAGTGCCATTCATTGTAGCAAGGATTAAACGTACCAAGTTGTCAGATAGGTTAGAGAACCCCACAAATGAATTTCTCGTACCCTTATTTGCTGATGGCTTGCAGTGGAAGGAAATGGATGTGAGTTTCAGTCTTTTGGCCATCCAAGTAAGTTTCTTTGAGTATGGCGGAATTGCTGTCAGTTTGTGCCTGTCACATAAAATAGGCGATGCTTCTACCATGACCAGATTTATAAATGATTGGGCCAAAGCTAATAAAGGAGCAAATGAGTTAGCATCTCCCGTGTTCAATGGTTCTTCAGTTTTTCCACATGGCGACCTACCAGTTTTTCCTGAAGTTGTGGTTGTGGGTAGCAGCAATCCTGTTGTGTGTAAAAGGTTTGTGTTTGATGGACCTCAGATTAATGCTCTGAAGTCAATGCTATCTCACGAAGTGCAAAATCCCACAAGAGTGGAAGTGGTATCTGCAATTATATACAAGTGTTTCATATCAACACTCAATTCAATTTCAGGTTCTGCAACTAGGGCAACTGCTCTCACTCATGCAATCAACTTGCGCCCTAGAGTGGTACCCCCACTGCCAGAAAACTCCATGGGAAATATGGGGTGGACTTTCTTGGTGACGACCACAACTGAAATTAGTGATGAAGAAACATTTTTGGTCGGTTTGGTTAGTAATATGAAAGAAGCTTCCAGGAGTTTTTGTGATAAATATGCAAAGAACTTTAGTGGGCCACAGTGGTCTTCCCTCATCTCCGAGTGTCTCAAAGACTTCGCAGCTTTTTTCAGTGATGAAAATCAGATTGTTTGCAAGTTCAGCAGCTGGTGTAAGCTTCCAATTTATGAAGTGGATTTCGGTTGGGGAAAGCCAACATGGGTCACAACCTCAGGTTGTGGTTTCAAGAACAGTGTTATTCTGATGGACAGTAAAAATGGAGATGGGATAGAAGCGTTGGTTAATCTGGAAGAGCAAGAGATGGATATGTTTGAGAGTGACCCATTGCTCCTTCCATATCTAAGCCACTGCTAA 1302 0.4163 MECELLCREIVKPTSPTPSHLRIYSLSFLDHIIFSNYSSIIYFYDHQICYTPSKIDEKFNELRKSLSETLALYYPFAGRLRDRVSVDCNDEGVPFIVARIKRTKLSDRLENPTNEFLVPLFADGLQWKEMDVSFSLLAIQVSFFEYGGIAVSLCLSHKIGDASTMTRFINDWAKANKGANELASPVFNGSSVFPHGDLPVFPEVVVVGSSNPVVCKRFVFDGPQINALKSMLSHEVQNPTRVEVVSAIIYKCFISTLNSISGSATRATALTHAINLRPRVVPPLPENSMGNMGWTFLVTTTTEISDEETFLVGLVSNMKEASRSFCDKYAKNFSGPQWSSLISECLKDFAAFFSDENQIVCKFSSWCKLPIYEVDFGWGKPTWVTTSGCGFKNSVILMDSKNGDGIEALVNLEEQEMDMFESDPLLLPYLSHC* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01677 433 Pfam Transferase family 4 424 - -
Pte10g01677 433 PANTHER F21J9.9 4 427 - -
Pte10g01677 433 Gene3D - 211 425 IPR023213 -
Pte10g01677 433 Gene3D - 1 199 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01677 Pte-Chr10 35161967 35163268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01677 1 421 Monolignol Biosynthesis Gene Families AT5G48930 24.449 2.53e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01677 - - qsa:O6P43_023903 475.322