Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01675 ATGTTTTCAATGCCCAGCTCGAGGCATTCCTTCTTCTCCTTCTCCTTCTACACCTTCCCCACTTCTTCCTCTTCATTCTTCTGTAGTTTTCTCCTATTTACTACTCTCTTGTGCATTCCTGTTTTCTCTGCTAACCGTGAAGCTTCTGCTTTGTTTTCATGGCTGCACAGTTCTTCCTCAGCACCCTCTCCGTCTTTTTCCAACTGGAACATACTTGACACCACTCCATGCAACTGGACCTCTATAACATGTTCACCTCAAGGTTTTGTCACTGAAATCAATATACAGTCAATCACCCTTGAGCTTCCATTGCTGTCCAATCTCTCCTCCTTCGGTTTCCTTCAAAAACTTGTTGTCTCTGATGCTAATCTCACTGGAATAATTCCAAATGAGATCGGCGATTGCTCTGAGCTCACTGTGATCGACCTTAGCTCAAACAGTCTTGTTGGTTCTATCCCTGCAAGTATAGGCAATCTCAGACGCCTAGAAAGTTTGATATTGAATTCTAACCAGCTCAATGGGAAAATCCCTGTTGAGCTAAGCAGTTGTATTGTTCTCAGAAACTTGCTTCTCTTCGATAACCAGCTGATTGGGACTATCCCAGCTGCGATAGGAAAGTTGTCCAGACTTGAGGTGCTAAGAGCAGGAGGGAACAAAGACATTGTTGGAAATATCCCAGCAGAGCTTGGTGAATGCAGCAACTTGACAGTGTTGGGACTAGCAGATACTAGAATTTCAGGGTTCTTACCAACCTCATTGGGTAGACTTAGTAAGCTTCAGACATTGTCTATCTACACCACATTTCTCTCTGGTGAGATTGCTCCTGATTTAGGTAACTGCTCTGAGCTTGTCAACTTGTTTCTTTATGAGAACAGTCTATCAGGGTCAATTCCATCTGAGCTTGGTAAGCTGCAAAAGCTGGAAAGGTTACTGCTATGGCAGAATAGTCTAGTTGGGTCTATCCCTGAAGAAATTGGCAACTGTACCAGCTTGAAAATGATTGATTTCTCTTTGAATTCTTTGTCTGGAACAATACCATTGTCTATAGGAGTCCTTACTGAACTTGAGGAGTTTATGATTAGCAATAACAATGTGTCTGGTTCAATACCCTCTAATCTTTCAAATTGTACAAGCCTCGTGCAACTTCAAGTTGATACAAATCAGATTTCTGGTTTGATACCCCAAGAGCTCGGGAAGTTGTCAAATCTCAATGTCTTATTAGCGTGGCAGAACCAACTTGAAGGAAGCATTCCTTCAAGTCTGGCCAGTTGTAGCAATCTCCAGCAATTAGATTTGTCACACAATGCACTTACTGGTAGTTTCCCTACTGGCCTTTTTCAGCTCCAAAATCTCACAAAACTGCTCCTGATTTCCAATGACCTGTCTGGCACTTTGCCAACTGAAATCGGTAATTGCAGCTCCCTGATAAGGCTGCGGCTAGGAAACAACCGAATTGTTGGAGGCATTCCCCAAACAATTGGCAATCTCAAGAGCTTAAATTTTCTTGATCTATCTGGAAACCATCTCTCTGGACAAGTTCCAGATGAGATTGGTAGCTGCACAGAATTACAGATGATAGACCTCAGCATCAATAACTTAGAAGGTCCTCTGCCGAACACATTGTCATCTCTATCAGGATTACAGGTACTGGATGCTTCATCCAATCAATTGTCGGGTCATATCCCTGCGAGCTTAGGTCGTCTTGTTTCCTTGAATAAGTTAATCCTAGGTAGGAATTCTTTCTCCGGACCAGTTCCTCCTTCTCTTAGTCTATGTTCAAGTTTGCAACTGCTTGACCTAAGCAGAAATGAGCTCACTGGAAGCATTCCAGTCGAAGTAGGCCACATGCAGAGCCTCGAGATTGCTCTCAACCTTAGCTGCAATACTTTTACCGGGCCAATCCCGTCAGAACTGTCAGCATTGACCAAGCTTTCTGTGTTGGACCTGTCCCACAACAAGTTGGAAGGAGACTTGAATCCACTTGGAGGGCTTGATAATCTTGTGTCTCTTAATGTCTCTTACAACAATTTCACTGGTTATCTCCCTGACAATAAGCTTTTCAGGCAACTCTCAGCTAAAGATTTAGCTGGAAATGAGGGTCTTTGTTCTTTAGGCCGGGACTCATGTTTCTTAAGTAATGTTGGGGAAGCGGGCGTACAAAATGGTGTGAGAAAATCGCACAAGCTGAAAGTCACAATTGGATCGTTGATTGTATTGACAATAGTGATGGTTGGTATGGGAATAATTGCCATGTTTAGAGTGCGAAGAGCAATGAGAGGCGATGATGAATCGGAACTCGGGGACTCATGGCCATGGCAATTCACCCCGTTTCAGAAGCTTAATTTCTCAGTGGAACAAGTATTGAGATGCTTAGTGGATGCAAATATAATTGGAAAAGGCTGCTCGGGGATTGTTTATCGAGCTGATATGGATAATGGTGAAGTCATTGCTGTGAAGAAATTGTGGCCAGTGGCAATGACTCCAAGCAATGGATATAGGGATGAGAAAAGTGACGTTCGAGACTCATTTTCAGCAGAAGTCAAGACCCTTGGTACAATTCGTCATAAGAACATTGTCAGGTTCTTGGGGTGTTGCTGGAATCGAAACACGAGGTTGCTCATGTATGATTACATGCCAAATGGAAGCTTGGGCAGTCTGCTCCATGAGAGAAGTGGGAATTCATTGGACTGGGAACTTAGATACCAAATCTTGCTGGGGGCAGCTCAGGGTCTTGCTTATTTACACCATGATTGTGTTCCTCCAATTGTCCACAGAGACATCAAAGCCAATAACATCCTTATCGGCCTTCAATTCGAACCTTACATTGCCGATTTTGGTCTAGCTAAGCTTGTTGATGATGGCGACTTTGCTCGGTCTTCCAACACAGTTGCTGGTTCTTATGGTTATATAGCCCCAGAATACGGTTACATGATGAAGATTACAGAGAAGACTGATGTCTATAGCTATGGTGTAGTCATGTTGGAAGTCTTGACAGGCAAGCAACCAATTGATCCAACAATACCAGATGGGATGCATGTGGTGGACTGGGTGAAACGACAGAGAGGCGGGGAAGACGTCTTGGATTCCAGTCTGTTATCAAGACCTGAATCAGACATTCAGGAAATGAAGCAAGCACTAGGCATAGCTTTGTTGTGTGTAAACTCATCACCTGATGAAAGACCAACCATGAAAGATGTGGCTGCATTACTTAAAGAAATTAAACATGAAAGAGAGGATTATTCAAAGGTTGATGTACTTCTCAAGGGTTCTCCTGCAAACGCTGATCAAGTAAGTCAACAATCTAGTGGACTTCCAGCATCATCATCAGCAGCTGCAACAGTAATGAAGAAGTTGTATCCGAAGAGCAATAACACAAGCTTCTCTGCATCTTCATTGCTTTATTCATCTTCCTCTTAA 3417 0.4317 MFSMPSSRHSFFSFSFYTFPTSSSSFFCSFLLFTTLLCIPVFSANREASALFSWLHSSSSAPSPSFSNWNILDTTPCNWTSITCSPQGFVTEINIQSITLELPLLSNLSSFGFLQKLVVSDANLTGIIPNEIGDCSELTVIDLSSNSLVGSIPASIGNLRRLESLILNSNQLNGKIPVELSSCIVLRNLLLFDNQLIGTIPAAIGKLSRLEVLRAGGNKDIVGNIPAELGECSNLTVLGLADTRISGFLPTSLGRLSKLQTLSIYTTFLSGEIAPDLGNCSELVNLFLYENSLSGSIPSELGKLQKLERLLLWQNSLVGSIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGVLTELEEFMISNNNVSGSIPSNLSNCTSLVQLQVDTNQISGLIPQELGKLSNLNVLLAWQNQLEGSIPSSLASCSNLQQLDLSHNALTGSFPTGLFQLQNLTKLLLISNDLSGTLPTEIGNCSSLIRLRLGNNRIVGGIPQTIGNLKSLNFLDLSGNHLSGQVPDEIGSCTELQMIDLSINNLEGPLPNTLSSLSGLQVLDASSNQLSGHIPASLGRLVSLNKLILGRNSFSGPVPPSLSLCSSLQLLDLSRNELTGSIPVEVGHMQSLEIALNLSCNTFTGPIPSELSALTKLSVLDLSHNKLEGDLNPLGGLDNLVSLNVSYNNFTGYLPDNKLFRQLSAKDLAGNEGLCSLGRDSCFLSNVGEAGVQNGVRKSHKLKVTIGSLIVLTIVMVGMGIIAMFRVRRAMRGDDESELGDSWPWQFTPFQKLNFSVEQVLRCLVDANIIGKGCSGIVYRADMDNGEVIAVKKLWPVAMTPSNGYRDEKSDVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERSGNSLDWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLQFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKTDVYSYGVVMLEVLTGKQPIDPTIPDGMHVVDWVKRQRGGEDVLDSSLLSRPESDIQEMKQALGIALLCVNSSPDERPTMKDVAALLKEIKHEREDYSKVDVLLKGSPANADQVSQQSSGLPASSSAAATVMKKLYPKSNNTSFSASSLLYSSSS* 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01675 1138 ProSitePatterns Protein kinases ATP-binding region signature. 797 820 IPR017441 GO:0005524
Pte10g01675 1138 PANTHER RECEPTOR-LIKE PROTEIN 55 451 1074 - -
Pte10g01675 1138 FunFam Predicted protein 202 297 - -
Pte10g01675 1138 Gene3D Ribonuclease Inhibitor 536 617 IPR032675 -
Pte10g01675 1138 Gene3D Ribonuclease Inhibitor 158 244 IPR032675 -
Pte10g01675 1138 Pfam Leucine rich repeat N-terminal domain 44 85 IPR013210 -
Pte10g01675 1138 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 426 713 - -
Pte10g01675 1138 Gene3D Phosphorylase Kinase; domain 1 776 877 - -
Pte10g01675 1138 Gene3D Ribonuclease Inhibitor 245 343 IPR032675 -
Pte10g01675 1138 Gene3D Ribonuclease Inhibitor 441 535 IPR032675 -
Pte10g01675 1138 Gene3D Transferase(Phosphotransferase) domain 1 878 1089 - -
Pte10g01675 1138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 922 934 IPR008271 GO:0004672|GO:0006468
Pte10g01675 1138 SMART LRR_typ_2 352 376 IPR003591 -
Pte10g01675 1138 SMART LRR_typ_2 496 520 IPR003591 -
Pte10g01675 1138 SMART LRR_typ_2 424 448 IPR003591 -
Pte10g01675 1138 SMART LRR_typ_2 641 660 IPR003591 -
Pte10g01675 1138 SMART LRR_typ_2 159 183 IPR003591 -
Pte10g01675 1138 SMART LRR_typ_2 592 616 IPR003591 -
Pte10g01675 1138 SMART LRR_typ_2 544 568 IPR003591 -
Pte10g01675 1138 SMART LRR_typ_2 304 328 IPR003591 -
Pte10g01675 1138 SMART LRR_typ_2 664 689 IPR003591 -
Pte10g01675 1138 SUPERFAMILY Protein kinase-like (PK-like) 769 1070 IPR011009 -
Pte10g01675 1138 PRINTS Leucine-rich repeat signature 641 654 - -
Pte10g01675 1138 PRINTS Leucine-rich repeat signature 427 440 - -
Pte10g01675 1138 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 774 877 - -
Pte10g01675 1138 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 44 201 - -
Pte10g01675 1138 Pfam Leucine rich repeat 114 172 IPR001611 GO:0005515
Pte10g01675 1138 Gene3D Ribonuclease Inhibitor 618 709 IPR032675 -
Pte10g01675 1138 Gene3D Ribonuclease Inhibitor 344 440 IPR032675 -
Pte10g01675 1138 SMART serkin_6 791 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01675 1138 SUPERFAMILY L domain-like 393 710 - -
Pte10g01675 1138 Pfam Protein tyrosine and serine/threonine kinase 795 1068 IPR001245 GO:0004672|GO:0006468
Pte10g01675 1138 SUPERFAMILY L domain-like 58 406 - -
Pte10g01675 1138 ProSiteProfiles Protein kinase domain profile. 791 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01675 1138 FunFam Predicted protein 298 395 - -
Pte10g01675 1138 Gene3D Ribonuclease Inhibitor 46 157 IPR032675 -
Pte10g01675 1138 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 878 1088 - -
Pte10g01675 1138 ProSiteProfiles Leucine-rich repeat profile. 643 665 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01675 Pte-Chr10 35122422 35126229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01675 39 1089 Receptor kinase-like Gene Family AT5G56040 49.014 0.0 992
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte10g01675 PK_Tyr_Ser-Thr 4.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01675 - - zju:125423339 1650.57