Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01650 ATGGCCTTGCCGCCATGCTCGTCTGAGACACTTGCTCAATATTTTGGTGCCAACACTACAGACCCTAATGGAGCAGCTCAGTTCATATGTAACCAGTTCGGCACCATTTCCAACAAATTCTCTGATACTACTTTTGCTATTGACTCCACCTACCTTCTGTTCTCAGCCTACCTTGTCTTCTCCATGCAACTTGGCTTTGCTATGTTATGTGCTGGTTCTGTCAGAGCCAAGAACACCATGAATATTATGCTCACCAATGTTCTTGACGCTGCAGCTGGAGGTCTTTTCTACTATCTTTTTGGTTTTGCCTTTGCCTTTGGTGCTCCTTCCAATGGTTTCATTGGACACCATTTCTTTGGACTTTCAGATGTCCCTTCAAAAGACTTCGACTATAGCTACTTCCTTTATCAATGGGCTTTTGCCATAGCAGCAGCTGGAATCACCAGCGGTTCCATTGCTGAGAGAACCCAGTTCGTCGCTTACCTTATATACTCTTCTTTTCTCACTGGGTTCGTCTACCCAGTTGTCTCTCACTGGATTTGGTCTGCTGACGGTTGGGCTAGTGCAACGAACCCAAATCTCTTGTTCGGATCCGGAGTCATTGACTTTGCAGGGTCTGGTGTTGTGCACTTGGTGGGTGGTATTGCTGGTCTATGGGGTGCACTTATTGAGGGACCGAGGATTGGCCGCTTTGACCGGAGTACCGGAAAAGCCATAACTTTGCGTGGGCACAGTGCTTCTTTGGTTGTACTCGGAACGTTTTTGCTTTGGTTTGGGTGGTACGGCTTTAATCCAGGTTCCTTCACCAAGATTTTAAACGCTTATGATTCCGGCAGCTACTACGGCCAGTGGAGCGCGGTCGGCCGGACCGCCGTGACAACTACCTTGGCTGGTTGCACAGCCGCCTTGACAACCCTTTTTGGAAAGAGAATACTTTCAGGACATTGGAATGTGACTGACGTGTGCAACGGGTTGCTCGGCGGGTTTGCCGCCATCACGGCCGGGTGCTCGGTAGTGGAGCCTTGGGCGGCAATCGTATGTGGCTTCGTAGCATCTCTAGTATTGATTGGTTGCAACAAATTGGCTGAGAAAATGAAGTACGACGATCCACTGGAAGCGGCTCAGCTGCACGGCGGCTGCGGCGCGTGGGGCATCATTTTCACAGCGTTGTTTGCGACGAAGAAATATGTGAATCAAGTGTATCCAGGTGTACCAGATCGGCCATACGGATTGTTCATGGGTGGTGGCGGAAAGTTGCTGGCGGCTCATATAATTCAGATATTAGTTATTATTGGATGGGTCAGTGCCACAATGGGCCCACTCTTCTTCATTCTACACAAACTGAAACTGTTGAGAATTTCTGCTGAAGATGAAATGGCGGGTATGGATCTAACCCGACACGGTGGGTTCGCCTATGATTATGAAGATGACTCATATAAACCCGGGATCCAATTGAAAAAAATTGAACCAAATGCAGGGACTCCAACCAGCGACACCATGTGA 1503 0.487 MALPPCSSETLAQYFGANTTDPNGAAQFICNQFGTISNKFSDTTFAIDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGAPSNGFIGHHFFGLSDVPSKDFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWIWSADGWASATNPNLLFGSGVIDFAGSGVVHLVGGIAGLWGALIEGPRIGRFDRSTGKAITLRGHSASLVVLGTFLLWFGWYGFNPGSFTKILNAYDSGSYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVASLVLIGCNKLAEKMKYDDPLEAAQLHGGCGAWGIIFTALFATKKYVNQVYPGVPDRPYGLFMGGGGKLLAAHIIQILVIIGWVSATMGPLFFILHKLKLLRISAEDEMAGMDLTRHGGFAYDYEDDSYKPGIQLKKIEPNAGTPTSDTM* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01650 500 SUPERFAMILY Ammonium transporter 47 453 - -
Pte10g01650 500 Gene3D Ammonium transporter AmtB like domains 28 490 IPR029020 -
Pte10g01650 500 NCBIfam ammonium transporter 48 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pte10g01650 500 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pte10g01650 500 Pfam Ammonium Transporter Family 51 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pte10g01650 500 FunFam Ammonium transporter 29 486 - -
Pte10g01650 500 PANTHER AMMONIUM TRANSPORTER 25 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01650 Pte-Chr10 34936082 34938361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01650 6 496 Inorganic Solute Cotransporters AT4G13510 79.757 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01650 K03320 - qsa:O6P43_022085 845.499