Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01649 ATGGCTGTTGAAGCTGAACCGCAGAAAGTCTCACCATCATCTTCTACTCAGAAGAATAAGAAGAACAAGGCTAAGAGAAAACGAACTCAGTTGCACGACTCTGAAATCGAACTTCTGGATTCACTTCCTTGGAATGCTTCACTTCCAGTGGATGACCGTTTCACCGTCGCAATTGGCTCCGATGAACTTGAAGGAGGTTTTCTTTCACTAGAAGAGATTGAAGAAGTTGATTATGGGTCAGTACTTCCTGGACTTGAAGAAGGAGGCAACAAGAAAAAGGAATCTAATAAGAGGAAAAAATTGACCAAGCGGAAAACAGGTATTGTTGTTGAGCATGAAAATGAGGTTGATGTTGCAATTGACGAAAATTTGGAAGGGAATGAGAATTTGGATGTTGACCTCAAGAAGAAGCCAAAAAAGAAGAATAAAAGTAAGAAGAAAACGAAGGAAGCTGGAGAATTTCCAAAAAAGGGGGACTCAGCTTCTAATACCAACATTAAAGATGACATTGATGAAGTGCCTTTTGATGGAGCTGATTACCATGCATGGGATGAGTTGAGATTGCATCCTTTAATTATGAAGTCAGTCTGCAGGCTTGGGTTCAAGGAACCAACACCTATACAGAAAACATGTATTCCTGCTGCTGCTCACCAAGGAAAGGATGTAATTGGAGCTGCAGAGACAGGCTCTGGAAAAACTCTGGCATTTGGTTTGCCAATTGTTCAGCGTCTTCTCGAGGAAAGGGAGAAAGCAGAAAGGATACTTGATGGAAAAGGAAAAGACCCAGAAAAATGTGCCCCTACAAGTGTTTTACGAGCTCTCATCATTACTCCAACGAGGGAACTGGCACTTCAGGTTACCGATCATCTTAAGGCAATCACAAAGGGTATTACTGTTAAGGTGGTTCCTATAGTTGGAGGTATTTTGACAGAAAAGCAGGAACGGCTTTTAAAATCCAGACCTGAAATCGTTGTAGGAACTCCAGGGAGATTATGGGAACTTATGTCAGGTGGAGAAAAACATCTGGTTGAGTTGCATTCACTGTCCTTTTTTGTGCTGGATGAGGCTGATAGAATGATAGAAAATGGCCATTTTCATGAGTTACAGTCAATAATTGACATGCTTCCTGTCTCTAGTAGCTCTCTTTCACATTGTTCTCAACATACACAAAGCTGTGGTGCTGTTTCTAGCATTCAAATAAAGAAAAGGCAGACATTTGTTTTTTCTGCAACTATTGCACTATCTGCAGATTTCCGAAAGAAACTAAAGCGTAGTTCAACAAAAGCAAAACAATCAACAAATGATGGGTTGAATTCAATTGAAACTCTAGCTGAACGAGCTGGAATGAGAGAAAATGCAGCAATAATTGATCTTACAAATGCATCAATTTTAGCAAATAAGCTGGAGGAATCATTTATTGAGTGCAGGGAAGAAGATAAAGACGCCTATTTGTATTATCTTCTGACTGTTCATGGAGAAGGCCGCACTATAGTATTTTGTACATCAATAGCAGCTTTGCGTCATATCTCTTCCTTATTGCGCGTTCTTGGTGTCAACGCTTCAACGCTTCATGCTCAGATGCAGCAACGAGCCCGCTTAAAGGCCATGGATCGATTTCGTGGAAACGGAAGTGATATACTTCTTGCCACAGATCTTGCAGCAAGGGGTCTTGATATTCCTGGTGTTCGGACTGTTATTCATTATCAGCTTCCACATTCAGCGGAGGTTTATGTTCATAGAAGTGGCAGAACAGCTAGAGCATCTTCTGATGGCTGTAGCATTGCACTGATTTCCCCAAGTGATAAATCAAAGTTTACTTCATTGTGCAAGTCATTTTCAAAGGAAGCATTTCGTCGATTTCCACTGGAGAATTCATATATGCCAGAGATCTTACAGAGATTGTCGCTTGCACGTCAAATTGATAAAATAAAACAGAAAGAATCCAAGGAGAATGCCAACAAAAGCTGGTTTGAACGTAGTGCAGAATCACTTGGATTGGTAGTCGATAATGATTACAGTGAGGATGAAAATGTGAACAAATATAAACAAACTAAAGCCAGCGCAATGAATTTGAAGAAATTGCAGAAGGAGCTCAATATACTACTCTCTCGACCTTTACAGTCGAAGACATTTTCACATCGTTACTTGGCTGGGGCTGGCGTTTCACCTCTCATACAGCAGCAACTTGACGAATTAGCTAGGCAAAAGCAAAGTGGGGATTCTGGTTTGGGAGAAAATAAGAGAAGAAAGTTGGTAGTTATTGGGAGGGATAGTGTTGAACCACTTCAAGCACTTCGGACTGGTGGTGAAGAGGTAGTGTTGGCTGATTTGTATTATACATTGTGTTAG 2349 0.4078 MAVEAEPQKVSPSSSTQKNKKNKAKRKRTQLHDSEIELLDSLPWNASLPVDDRFTVAIGSDELEGGFLSLEEIEEVDYGSVLPGLEEGGNKKKESNKRKKLTKRKTGIVVEHENEVDVAIDENLEGNENLDVDLKKKPKKKNKSKKKTKEAGEFPKKGDSASNTNIKDDIDEVPFDGADYHAWDELRLHPLIMKSVCRLGFKEPTPIQKTCIPAAAHQGKDVIGAAETGSGKTLAFGLPIVQRLLEEREKAERILDGKGKDPEKCAPTSVLRALIITPTRELALQVTDHLKAITKGITVKVVPIVGGILTEKQERLLKSRPEIVVGTPGRLWELMSGGEKHLVELHSLSFFVLDEADRMIENGHFHELQSIIDMLPVSSSSLSHCSQHTQSCGAVSSIQIKKRQTFVFSATIALSADFRKKLKRSSTKAKQSTNDGLNSIETLAERAGMRENAAIIDLTNASILANKLEESFIECREEDKDAYLYYLLTVHGEGRTIVFCTSIAALRHISSLLRVLGVNASTLHAQMQQRARLKAMDRFRGNGSDILLATDLAARGLDIPGVRTVIHYQLPHSAEVYVHRSGRTARASSDGCSIALISPSDKSKFTSLCKSFSKEAFRRFPLENSYMPEILQRLSLARQIDKIKQKESKENANKSWFERSAESLGLVVDNDYSEDENVNKYKQTKASAMNLKKLQKELNILLSRPLQSKTFSHRYLAGAGVSPLIQQQLDELARQKQSGDSGLGENKRRKLVVIGRDSVEPLQALRTGGEEVVLADLYYTLC* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01649 782 PANTHER RNA HELICASE 106 675 - -
Pte10g01649 782 Pfam Helicase conserved C-terminal domain 479 587 IPR001650 -
Pte10g01649 782 MobiDBLite consensus disorder prediction 1 32 - -
Pte10g01649 782 Pfam DEAD/DEAH box helicase 205 413 IPR011545 GO:0003676|GO:0005524
Pte10g01649 782 CDD SF2_C_DEAD 468 597 - -
Pte10g01649 782 MobiDBLite consensus disorder prediction 147 167 - -
Pte10g01649 782 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 213 430 IPR014001 -
Pte10g01649 782 Gene3D - 135 429 IPR027417 -
Pte10g01649 782 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 181 209 IPR014014 GO:0003724
Pte10g01649 782 CDD DEADc_DDX24 192 457 - -
Pte10g01649 782 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 352 360 IPR000629 -
Pte10g01649 782 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 467 628 IPR001650 -
Pte10g01649 782 MobiDBLite consensus disorder prediction 80 104 - -
Pte10g01649 782 Gene3D - 465 702 IPR027417 -
Pte10g01649 782 SMART helicmild6 507 588 IPR001650 -
Pte10g01649 782 MobiDBLite consensus disorder prediction 131 167 - -
Pte10g01649 782 SMART ultradead3 200 440 IPR014001 -
Pte10g01649 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 272 604 IPR027417 -
Pte10g01649 782 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01649 Pte-Chr10 34918412 34928435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01649 155 613 Eukaryotic Initiation Factors Gene Family AT1G72730 25.482 1.01e-37 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01649 K14805 - zju:107422736 998.423