LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte10g01647	ATGTACTCGAATTCGAGCAAGAGAAACAGGTGGAAAAACCATGGAGATTTATCTAGCACAAATGCTTTCACTACAACAATAGAGAAGCAGAACTCGATGGCTGCCATGAGAGAAATGATGTACCGAATAGCAGCCATTCAACTAATTAACATAGACCCAGAGTCTGTGAAGCCACCCAAGAGGAGAAACATCAAGATATCCAAGGATCCTCAGAGTATAGCTGCACCGCATAGAAGGGAAAGAATAAGCGAGAGAATTAGAATTCTGCAGAGACTCGTTCCTGGTGGGACGAGAATGGAGATAGCATCCTCAAATTCTTGA	321	0.4299	MYSNSSKRNRWKNHGDLSSTNAFTTTIEKQNSMAAMREMMYRIAAIQLINIDPESVKPPKRRNIKISKDPQSIAAPHRRERISERIRILQRLVPGGTRMEIASSNS*	107

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte10g01647	106	PANTHER	TRANSCRIPTION FACTOR HEC3-RELATED	7	103	IPR045843	GO:0003700\|GO:0006355
	Pte10g01647	106	ProSiteProfiles	Myc-type, basic helix-loop-helix (bHLH) domain profile.	66	106	IPR011598	GO:0046983
	Pte10g01647	106	MobiDBLite	consensus disorder prediction	1	23	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte10g01647	Pte-Chr10	34898512	34898832	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte10g01647	33	103	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT5G67060	80.282	1.32e-27	99.0

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte10g01647	-		-	tcc:18591179	139.428

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