Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01645 ATGGCTGTGGAAGTCGCATCTGAAGTTGGCAAGTCCCAAGATAATGAGGTCAAGCTCTTCAATCGTTGGAGCTTTGATGACGTTCAGGTCAATGACATTTCACTGGCTGATTATATTGGCGTGGTACCGTCAAAACATGCTACCTATGTTCCACATACTGCTGGAAGGTACTCTGTAAAGAGGTTTAGAAAAGCCCAGTGCCCAATAATTGAGAGGTTGACAAACTCATTGATGATGCACGGTAGAAACAATGGAAAGAAACTAATGGCTGTGAGAATTGTCAAGCATGCCATGGAAATCATACATCTGTTGACTGATCAAAATCCAATTCAAATCATCATTGATGCTATAGTCAACAGTGGACCACGTGAAGATGCTACTCGTATTGGTTCTGCTGGAGTTGTTAGGCGTCAGGCTGTTGATATATCACCTCTGCGACGTGTGAATCAGGCCATTTATCTTCTTACTACAGGTGCACGTGAAGCTGCGTTTAGAAACATCAAGACCATAGCAGAGTGCTTGGCAGATGAGCTTATTAATGCAGCAAAGGGATCATCCAACAGCTATGCAATCAAGAAGAAGGATGAGATCGAGCGCGTTGCCAAGGCTAACCGTTGA 618 0.4385 MAVEVASEVGKSQDNEVKLFNRWSFDDVQVNDISLADYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIIERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQIIIDAIVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01645 205 CDD uS7_Eukaryote 18 205 IPR005716 GO:0003735|GO:0006412|GO:0015935
Pte10g01645 205 Gene3D Ribosomal protein S7 domain 1 205 IPR036823 -
Pte10g01645 205 PANTHER RIBOSOMAL PROTEIN S7 12 205 IPR000235 GO:0006412
Pte10g01645 205 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 205 IPR000235 GO:0006412
Pte10g01645 205 ProSitePatterns Ribosomal protein S7 signature. 71 97 IPR020606 GO:0003723|GO:0003735|GO:0006412
Pte10g01645 205 NCBIfam 30S ribosomal protein S7 16 205 IPR005716 GO:0003735|GO:0006412|GO:0015935
Pte10g01645 205 SUPERFAMILY Ribosomal protein S7 18 205 IPR036823 -
Pte10g01645 205 Pfam Ribosomal protein S7p/S5e 59 205 IPR023798 -
Pte10g01645 205 FunFam 40S ribosomal protein S5 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01645 Pte-Chr10 34895528 34896682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01645 2 206 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 89.756 1.61e-138 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01645 K02989 - thj:104809939 369.007