Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01640 ATGGGTTCGCTCCTTCCGTTCCTAGATCTTAACCTTTTACCTGACCCTGCAACACCCTCCACCGCAAAAATGTTGATTCCCAAGATTGAGCCAAAGCTTGAACCTTTGGATGAACCAACACTGGCCCATGAAGCCCTCCAATCCCTAGACCCTCGGCCTGCGTTCGTTCCTGATTCTACCCCTACTGCGACGTCTAATTCCCTTCGTTCCCCTTTCTCCGATCAGAGCCAGAATCTTGCATCAACTGAAACGTCGGCCATTTCTTCATATTCTGACCAAGACACCGTGTACTCAGAGTTCTACCGGATTTCTGAGCTTTTCCGTACTGCTTTTGCGAAAAAGTTGAGTAAATTGGGAGACGTTGAGGTTCTGGACCCAGATTCACGTGCAATTGTACCTGTTCCACCAGAGAACCGGATTCCTACAGTTGTTGTGGCTAGGAGGAAGGAGCTTGTGAGAGTCACAAATCTTGGGGTTGAGGATCAGAGGTATTTCAGAGATGTCGTCAGACGGACCCGAATGATTTATAACTGTTTAAGGATATTGTCGGCGTTCGAGGACGAGAAAAGCCGAGGCGGTCCTGTGCCCATTAAGCGATTGAGAGGTCATCTTAGAGCTTCAGCTTTGATGAGAGAACGTGGGTTGTGGTTAAATCGTGATAAGAGGATAGTGGGTTCCATACCAGGTGTGTACATTGGTGACTTGTTCTTTTTCAGGATGGAAATGTGTGTACTTGGATTGCATGGTCAGCCTCAAGCTGGGATTGATTTCCTGCCAGCAAGCAAAAGCTTCAGTGGGGAATCAATAGCAACTAGTATTATAGTTTCTGGTGGGTATGAGGATGATGAGGATGGTGGTGATGTGATAATATATACTGGTCATGGAGGGCAGGATAAGCATTCTAGACAATGCTGTCATCAGAAGCTAGAAGGTGGAAACCTTGCGTTGGAGAGAAGTATGTATCATGGGATCGAAGTGAGAGTTATAAGAGGTGTCAAATATCATGGCAGTATAACTAGTAAGGTATATGTGTATGATGGGTTATATAGAATCATTGAATGTTGGTTTGATGTTGGCAAGTCGGGTTTCGGGGTTTACAAATACAAGCTTTTGAGAATTGAAGGGCAATCCCAAATGGGTAGTGAGACTCTTAGGATAGCTGCTAATCTTAGGGCCAGGCCATTGGAAATCAGACCAAGGGGTTACCTTTCTTTGGATATGTCACATAAGAAGGAATATGTCCCTGTAAGGCTTTTTAATGATATTGATTCCAACCAGGATCCTCTGTACTATGGATATCTTAGCAGGACCGCCTTTCCACCGTTTGTTTCTCTTCAGAGTGGGAATGGCAGTGGCTGTAGTTGTGTTTCAGTCTGTGGTGATAATTGCTTTTGTTCCACTAAAAATGGAGGTGAGTTTCCTTATGATCATAATGGACTTCTGTTGAGAGGGAAACCTGTTATTTTCGAATGTGGTCCTTTCTGTAGCTGTCCTCCAAACTGTAGGAACCGAGTTACTCAGAAGGGACTCAAGAGTGTGTTGGAAGTGTTTAGATCGAAAGAAACGGGTTGGGGAGTTAGGCCCTTGGAACTGATACATGCCGGTGCTTTTATATGTGAATACACAGGAGTCGTTTTGACGAGGGAACAAGCTCAGATTTTGTCAATGAATGGAGATGCGTTGATTTATCCAAATCGGTTTTCTGATAAATGGGCAGAATGGGGAGACCTATCTCTTGTATTTCCTGATTATGTTCGTCCATCATATCCATCAATTCCTCCATTGGACTTTGCCATGGATGTATCTAAAATGAGGAACGTTGCCTGCTATATGAGCCATAGCTCAACTCCTAATGTATTTGTGCAGCTTGTTCTTTATGATCACAACAATTTAATGTTCCCTCACCTTATGCTATTTGCAATGGAAAATATCCCTCCTCTGAGGGAGCTCAGTCTTGATTATGGAGTGGCTGATGAAGTGATGGGAAAACTGGCAATCTGTTACTGA 2007 0.441 MGSLLPFLDLNLLPDPATPSTAKMLIPKIEPKLEPLDEPTLAHEALQSLDPRPAFVPDSTPTATSNSLRSPFSDQSQNLASTETSAISSYSDQDTVYSEFYRISELFRTAFAKKLSKLGDVEVLDPDSRAIVPVPPENRIPTVVVARRKELVRVTNLGVEDQRYFRDVVRRTRMIYNCLRILSAFEDEKSRGGPVPIKRLRGHLRASALMRERGLWLNRDKRIVGSIPGVYIGDLFFFRMEMCVLGLHGQPQAGIDFLPASKSFSGESIATSIIVSGGYEDDEDGGDVIIYTGHGGQDKHSRQCCHQKLEGGNLALERSMYHGIEVRVIRGVKYHGSITSKVYVYDGLYRIIECWFDVGKSGFGVYKYKLLRIEGQSQMGSETLRIAANLRARPLEIRPRGYLSLDMSHKKEYVPVRLFNDIDSNQDPLYYGYLSRTAFPPFVSLQSGNGSGCSCVSVCGDNCFCSTKNGGEFPYDHNGLLLRGKPVIFECGPFCSCPPNCRNRVTQKGLKSVLEVFRSKETGWGVRPLELIHAGAFICEYTGVVLTREQAQILSMNGDALIYPNRFSDKWAEWGDLSLVFPDYVRPSYPSIPPLDFAMDVSKMRNVACYMSHSSTPNVFVQLVLYDHNNLMFPHLMLFAMENIPPLRELSLDYGVADEVMGKLAICY* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01640 668 MobiDBLite consensus disorder prediction 58 80 - -
Pte10g01640 668 Pfam SET domain 523 655 IPR001214 GO:0005515
Pte10g01640 668 SMART preset_2 404 496 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte10g01640 668 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 64 667 IPR025794 GO:0016571
Pte10g01640 668 ProSiteProfiles YDG domain profile. 225 372 IPR003105 -
Pte10g01640 668 MobiDBLite consensus disorder prediction 48 80 - -
Pte10g01640 668 ProSiteProfiles Pre-SET domain profile. 451 509 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte10g01640 668 SMART G9a_1 220 376 IPR003105 -
Pte10g01640 668 SMART set_7 512 661 IPR001214 GO:0005515
Pte10g01640 668 Gene3D SET domain 382 668 IPR046341 -
Pte10g01640 668 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 207 389 - -
Pte10g01640 668 ProSiteProfiles SET domain profile. 512 655 IPR001214 GO:0005515
Pte10g01640 668 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 111 656 - -
Pte10g01640 668 SUPERFAMILY SET domain 395 656 IPR046341 -
Pte10g01640 668 Gene3D - 222 381 IPR036987 -
Pte10g01640 668 Pfam Pre-SET motif 408 504 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte10g01640 668 Pfam SAD/SRA domain 224 376 IPR003105 -
Pte10g01640 668 SUPERFAMILY PUA domain-like 206 381 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01640 Pte-Chr10 34848333 34850543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01640 166 657 Su(var)3-9 homologs AT5G04940 39.638 3.11e-106 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte10g01640 SAD_SRA 3.5e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01640 K11420 - qsa:O6P43_003131 979.163