Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01631 ATGATCACTGAGTTCCTTTCCTATCATTTGCAGGACGAACTATCAGGCCCTATTAGTGCTCAAATCCTTGAGCTTTGTGATTCTGAGCTATTTCAAGAGGCGCTTCAGAAATCAGAGGTCACATCAAGTTCAAACTGTGGCTATGAAGACAACTCCTCTTATGAAACAAATGGTTCCATAGCACAAGAAATAGATCACAAAATCAATAGCAATAGCTTAGTCACTACACCATCAACTACTAGTACTAGTACTACCACAACAAACAACAACACAAACAACAGTACTAGCAACCTGTCCATAATCTTTGACGTACAAGAAGAAATGGACAATGACGTTTCTGCTTCGATCGACTTTTCGTCGTCTGCATCGTTGCCGGTGCTTCCATTTTTGACTACTCAAGATCCATTTGATTTCTCTTCTGTGGAACCTCAAATTCCATTAGCAGGTGGTCATCGAAACAATGCAGAGGGAATCCCTCAATACTCTGCTGATACTGTTCCTGCAGCATTGTTGGGGCCTCCATTGGCATCTAGTTTTGGAGATGACTGCTTATCTTCAGTCCCTTCTTATTATGTACCTCTGAACCCTTCATCTCCGTCATGTTCTTTTCTCAGCACTGGCATGGTAGCATACATGGCTAATGCCCCAATTAATACTGCACTATCTGCTGACAGTTCTGGGATGTTCAATGCAAGCATCCTTCTAGATTCAGAACTCCAACCAAAAGATTTGGAATTCCAAGGAGAAAATGGTGGCATTTTCTGTCAGGATTCAATGCAGAGGGCATTTAATCGAACAGATCTTCAGGCACTCACTACAGAGAGTCCACAACTTGCGGCTGGTCCTTGTAGTGCTACTTCTTTGACGCCAGAGATCTCGACCTTGGAAGACTCAACCTTCAAAGTTGGCAAACTCTCTGCAGAACAGAGGAAAGAAAAGATTCAGAGATACATTAAGAAAAGGAACCAAAGGAACTTCAGCAAGAAAATCAAGTATGCCTGCCGCAAAACACTAGCAGACAGCAGGCCTCGAGTTAGGGGAAGATTTGCAAAGAATGATGAGTTTGGAGAGACACATAGACAAGCTAGTAGCAATCATGAAGAAGACGATGACGAAGAAGTAGTTGTGAAAGAAGAAAAGGACATGGTTGATTCCTCAGATATCTTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATACTATCCAGTCCTGGATTTGA 1227 0.423 MITEFLSYHLQDELSGPISAQILELCDSELFQEALQKSEVTSSSNCGYEDNSSYETNGSIAQEIDHKINSNSLVTTPSTTSTSTTTTNNNTNNSTSNLSIIFDVQEEMDNDVSASIDFSSSASLPVLPFLTTQDPFDFSSVEPQIPLAGGHRNNAEGIPQYSADTVPAALLGPPLASSFGDDCLSSVPSYYVPLNPSSPSCSFLSTGMVAYMANAPINTALSADSSGMFNASILLDSELQPKDLEFQGENGGIFCQDSMQRAFNRTDLQALTTESPQLAAGPCSATSLTPEISTLEDSTFKVGKLSAEQRKEKIQRYIKKRNQRNFSKKIKYACRKTLADSRPRVRGRFAKNDEFGETHRQASSNHEEDDDEEVVVKEEKDMVDSSDIFAHISGVNSFKCNYTIQSWI* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01631 408 ProSiteProfiles CCT domain profile. 310 352 IPR010402 GO:0005515
Pte10g01631 408 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 97 368 IPR045281 GO:0009909
Pte10g01631 408 MobiDBLite consensus disorder prediction 349 373 - -
Pte10g01631 408 Pfam CCT motif 310 352 IPR010402 GO:0005515
Pte10g01631 408 MobiDBLite consensus disorder prediction 349 367 - -
Pte10g01631 408 MobiDBLite consensus disorder prediction 69 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01631 Pte-Chr10 34779907 34782431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01631 306 368 C2C2-CO-like Transcription Factor Family AT5G57660 44.118 2.93e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte10g01631 CCT 8.9e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01631 - - aprc:113871720 462.996