Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01594 ATGGATACTATGTTTCACTCGCCAAATTCTGAGTTTTCTTCTAGTTGTTCTTTCACTACGTCTCACGATTCTTTTTCGTGGGATGGGCTTACGTTCGAGAATGGTTCTCTTCCCTTCAATGAAAATGATTCTGAAGAGATGCTTTTGTATGGGCTCATATCCAACGCTACCAATGGACGTAGCACGCCAGCATGTGAGAATCAAATTAAGGAAGAAGAGGTTAGTTCCACTGAGAAGGGAAGACACTGCAGAAAGGAGAAGTCTTACAGAGGTGTAAGGAGAAGGCCATGGGGGAAATTTGCTGCAGAGATAAGGGATTCAACTCGGCATGGTATAAGGGTGTGGTTGGGAACCTTTGATAGTGCAGAGGCTGCAGCTTTAGCTTATGATCAAGCTGCTTTTTCTATGAGGGGTTCTGCTGCTACTCTCAATTTCCCCGTAGAAAAGGTGAGAGAGTCTCTCCAAGAGATGAATCATGGTTTAGAAGTTGGGGGTTCACCTGTGGTGGCTTTGAAGAGAAAGCACTCGATGAGAAAGAAAATCACTTGCAAGAAAAGCAAAGACATAGATGTCAGGATAGAAAATGTGGTGGTGTTCGAGGATCTTGGTGCAGATTACTTGGACCAACTATTGAGTAGTAGTTCATCACAGAACCCGAGAGCTTCGTGA 669 0.441 MDTMFHSPNSEFSSSCSFTTSHDSFSWDGLTFENGSLPFNENDSEEMLLYGLISNATNGRSTPACENQIKEEEVSSTEKGRHCRKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAATLNFPVEKVRESLQEMNHGLEVGGSPVVALKRKHSMRKKITCKKSKDIDVRIENVVVFEDLGADYLDQLLSSSSSQNPRAS* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01594 222 CDD AP2 87 147 IPR001471 GO:0003700|GO:0006355
Pte10g01594 222 Gene3D AP2/ERF domain 87 148 IPR036955 GO:0003700|GO:0006355
Pte10g01594 222 SMART rav1_2 88 152 IPR001471 GO:0003700|GO:0006355
Pte10g01594 222 Pfam AP2 domain 88 138 IPR001471 GO:0003700|GO:0006355
Pte10g01594 222 PRINTS Ethylene responsive element binding protein signature 89 100 IPR001471 GO:0003700|GO:0006355
Pte10g01594 222 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Pte10g01594 222 FunFam Ethylene-responsive transcription factor 2 87 148 - -
Pte10g01594 222 ProSiteProfiles AP2/ERF domain profile. 88 146 IPR001471 GO:0003700|GO:0006355
Pte10g01594 222 SUPERFAMILY DNA-binding domain 88 148 IPR016177 GO:0003677
Pte10g01594 222 PANTHER DNA-BINDING DOMAIN 62 216 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01594 Pte-Chr10 34471354 34473131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01594 37 214 AP2-EREBP Transcription Factor Family AT3G23240 64.481 7.46e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte10g01594 AP2 8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01594 K14516 - jre:109007057 275.018