Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01592 ATGGAAGTTGGAGGAAGGGACGTAAGAAACGGGAGAACTAAAGAAAACGAAGTTGTTCTTCAAGTTTCATGTAATGAAGGAGAAGCTTTCACTGCAGGTAAAGCTGGAGGAGATGGAAAAAGTTACACAGTGGCTGAAGAAGAAGGCTCTTCTTCCTCCCAACGAAATTCCCAGTTGGATTCTTCTCCTCATGATCTCAGACAAAAGTTGAATATTGAGCTAAATGAGGTTGAGAATCCCAGTTATTGTGGAGTCCAAGCTTCATTGTATACTACTGCAGGCTCAGATTCCCCAGAGTCGGTGACTGCAATATCAACTTCAAATCTGAAAAGTGCTCCAAGAAATTTAGCTGAGTCCGTAACTAGACGGAGGTCTGTGGTGGTTTCAGAATTTTCCAAGCCAAAATCACGATTTGTAGAATCACCACCTCCAACTGATGGAAGATTGATTGGAGGAAAAACTAAAGTTGCCGGTACTCTCACAAGGGATAACTTACCGTCGAGGAATTTGTCTCATGACAGAGATGAAGAAGATGATGAAGTAGACAACACTACCATTTCAAGTCTACAGCAAGGATCGAGAACGAGTAAGAAGCGGAAATTAAAGGTCTCAGTTGAGTGGATTGCTTTTGTTTGCATTTGGGGTTTTTCGATTGCCAGCTTAGCTGTACATCAATTGAAGGAGACTGTGATTTGGGGTTTAGAATTGTGGAAATGGAGTCTGCTGGTTTCGGTTATTTTCAGTGGGAGATTGGTTACGGAGTGTTTTATTAACTTCACGGTTTTCTTGATTGAAAGGAATTTCTTGTTTAAAAAGAAGGTTCTGTATTTTGTGTATGGTATGAAGAAGAGTGTTCAGATTTTTATTTGGTTGAGTTTGGTTCTTATAACTTGGTATATGCTCTTCCGCCATAGTCAGCATAGATCAGAAGAAACTACAGATATTCTCGATTGCATTACGAAAGCTCTTTATTCTAGTCTTATTGGTGCAGCTATATGGCTTATGAAAACATTTCTTGTAAAACTATTGGCTTCTTCTTTCCAATGTTCAAGATTCTTTGACAGGATTCAGGAATCGATTTTCCATCAGTATGTACTTCGAACGCTTTCGGGTCCTCCTGTACTGGAGAGGGCTGTGAAGATTGGAATAAGGGGAAATCATGGCATGTTACGTTTCAATACAGAAAGACACGAGGGAATGCAAGAGGTCATCGATATGAACAAGTTGAAATCATTGGACAGAGGGAAAGTTTCAGCATGGACAATGAAAGGCTTGATCGATGCTATAAGGAGTTCAGGGCTCTCTACCATCTCCAATACACTGGACTACGTTGATCACAAAAAAGGGTATGAGCATCAGGACAAGGAAATTACAAGTGAATGGGAAGCAAGGACTGCTGGGTACTGGATTTTCAGAAATGTCGCCCAGCCTGGCAGCAAGTACATTGAAGAGGAGGATCTCTTGCGCTTCATGAAAAGAGATGAGGTGGACAATGTTCTTCCACTATTTGAAGGATCTGTGGAGACTAGAAAGATCAAGAGGAAAGCTCTGAAGAACTGGCTGGTCAATGTTTATCTCGAACGTAAATCTCTAGTTCATTCCTTAAATGATGCTAAAACAGCCATAGAGGAGTTGAACAAGCTTGCTTCCGCAGTTGTGCTCATCGTCATCGTCATTGTGTGGTTACTTGTAATGGGATTCTTAACAATGCACGTCCTTCTCTTCATTTTATCTCAGCTCTTACTGGTGGTGTTTATGTTTGGCAACACAGCCAGGACCTTATTTGAAGCAATCATATTTGTGTTTGTGATGCATCCATTTGATGTAGGTGACCGTTGTGTCATTGACGGAGTGCAGATGGTCGTGGAAGAGATGAATATACTGACTACAGTGTTCCTGAAATACGACAATGAGAAGATATACTATCCAAATTCAGTTCTGGCAACCAAACCTATCGGCAATTTTTACAGGAGCCCCGAAATGAGTGACTCAATCGAATTCTCTGTGCACATTTCTACATCAATTGACGCAATTGGAGCATTAAAGCTCAGAATAAAGGCGCACTTGGAAAGTAAGCCTCAACACTGGCGTCCAAGCCATTATGTGATAGTGAAGGAGATTGAGAATGTTAACAAGATGAAAATGGCACTCTATGTTACTCACACCGTAAATTTCCAGAACTATATAGACAAGAACAACAGAAGATCTGAACTTCTATTCGAGCTGCAGAAAATATTCGAAGATCTTCATATAAGATATTACCTTCTGCCGCAAGAAGTCCATCTCAGATATGTAGGAGATGCAGCCACCACAGGTCTTTCTGTATAG 2328 0.4089 MEVGGRDVRNGRTKENEVVLQVSCNEGEAFTAGKAGGDGKSYTVAEEEGSSSSQRNSQLDSSPHDLRQKLNIELNEVENPSYCGVQASLYTTAGSDSPESVTAISTSNLKSAPRNLAESVTRRRSVVVSEFSKPKSRFVESPPPTDGRLIGGKTKVAGTLTRDNLPSRNLSHDRDEEDDEVDNTTISSLQQGSRTSKKRKLKVSVEWIAFVCIWGFSIASLAVHQLKETVIWGLELWKWSLLVSVIFSGRLVTECFINFTVFLIERNFLFKKKVLYFVYGMKKSVQIFIWLSLVLITWYMLFRHSQHRSEETTDILDCITKALYSSLIGAAIWLMKTFLVKLLASSFQCSRFFDRIQESIFHQYVLRTLSGPPVLERAVKIGIRGNHGMLRFNTERHEGMQEVIDMNKLKSLDRGKVSAWTMKGLIDAIRSSGLSTISNTLDYVDHKKGYEHQDKEITSEWEARTAGYWIFRNVAQPGSKYIEEEDLLRFMKRDEVDNVLPLFEGSVETRKIKRKALKNWLVNVYLERKSLVHSLNDAKTAIEELNKLASAVVLIVIVIVWLLVMGFLTMHVLLFILSQLLLVVFMFGNTARTLFEAIIFVFVMHPFDVGDRCVIDGVQMVVEEMNILTTVFLKYDNEKIYYPNSVLATKPIGNFYRSPEMSDSIEFSVHISTSIDAIGALKLRIKAHLESKPQHWRPSHYVIVKEIENVNKMKMALYVTHTVNFQNYIDKNNRRSELLFELQKIFEDLHIRYYLLPQEVHLRYVGDAATTGLSV* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01592 775 Gene3D - 606 655 IPR023408 -
Pte10g01592 775 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 12 764 IPR016688 -
Pte10g01592 775 Pfam Mechanosensitive ion channel 547 752 IPR006685 GO:0016020|GO:0055085
Pte10g01592 775 SUPERFAMILY Sm-like ribonucleoproteins 596 655 IPR010920 -
Pte10g01592 775 MobiDBLite consensus disorder prediction 45 63 - -
Pte10g01592 775 MobiDBLite consensus disorder prediction 29 63 - -
Pte10g01592 775 FunFam Predicted mechanosensitive ion channel 606 655 - -
Pte10g01592 775 MobiDBLite consensus disorder prediction 162 189 - -
Pte10g01592 775 PIRSF Memb_At2g17000 6 773 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01592 Pte-Chr10 34445521 34450288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01592 93 762 Mechanosensitive Ion Channel Family AT5G12080 49.927 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01592 K22048 - qsu:112023488 846.654