Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01574 ATGGCCTTAGCCATTTCGTCCACTGCGACTGCATTGTCAAGCATTCCTAAGAAGTCTATAAAGGAAGTGCATCAGAAGATATTCCATGACAAAAAATCATTAAGGTTGTCCGAGAGGTTCCGAGCTAATGGGAAGAAAGGGGTGTCAAGTGTTTGTGTGCCACTACCTCCCGATAGACCATTGTGGTTCCCTGGCAGTTCACCGCCCGAGTGGCTTGATGGCAGTCTCCCTGGTGATTTTGGCTTCGACCCTCTTGGATTAGGGTCTGATCCAGAGCAGCTTAAGTGGTTTGCACAAGCAGAGTTAATGCACAGCAGATGGGCAATGCTTGCTGTGGCAGGAATTCTAATCCCAGAATGTCTTGAAAAACTACATTTTATTGAAAACTTTTCATGGTACGATGCTGGATCACGTGAGTATTTTGCAGACACTACAACATTGTTCGTTGTGCAAATGGCCTTGATGGGATGGGTGGAAGGGAGAAGATGGGCTGATATGCTGAAACCGGGCTGTGTGGACATTGAACCTAAATTACCAAATAGAAAAAATCCAACCCCAGATGTTGGATATCCAGGTGGGTTATGGTTTGACCCCATGATGTGGGGAAGAGGATCTCCAGAGCCTGTCATGGTGTTGAGGACCAAGGAGATCAAGAATGGCAGACTTGCTATGCTGGCTTTTGCCGGATTTTGTTTCCAAGCTATTTATACTGGGGAAGGTCCTCTTGAAAACTTGATGTCACACCTTGCTGATCCTGGTCACAACAATGTTTTCTCGGCTTTTTCATCGCACTAG 795 0.4616 MALAISSTATALSSIPKKSIKEVHQKIFHDKKSLRLSERFRANGKKGVSSVCVPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPEQLKWFAQAELMHSRWAMLAVAGILIPECLEKLHFIENFSWYDAGSREYFADTTTLFVVQMALMGWVEGRRWADMLKPGCVDIEPKLPNRKNPTPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFAGFCFQAIYTGEGPLENLMSHLADPGHNNVFSAFSSH* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01574 264 FunFam Chlorophyll a-b binding protein, chloroplastic 69 254 - -
Pte10g01574 264 Pfam Chlorophyll A-B binding protein 68 234 IPR022796 -
Pte10g01574 264 SUPERFAMILY Chlorophyll a-b binding protein 57 261 - -
Pte10g01574 264 Gene3D Chlorophyll a/b binding protein domain 69 254 - -
Pte10g01574 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 260 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01574 Pte-Chr10 34286356 34288437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01574 42 262 Chloroplast and Mitochondria Gene Families AT3G61470 63.801 2.33e-103 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01574 K08908 - qsa:O6P43_002643 448.358